Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012162A_C01 KMC012162A_c01
(873 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565050.1| expressed protein; protein id: At1g72970.1, sup... 150 2e-36
pir||T50764 adhesion of calyx edges protein ACE [imported] - Ara... 150 2e-36
gb|AAO15286.1| Putative mandelonitrile lyase [Oryza sativa (japo... 121 1e-26
gb|AAO00719.1| putative mandelonitrile lyase [Oryza sativa (japo... 120 3e-26
pir||T50698 probable mandelonitrile lyase (EC 4.1.2.10) [importe... 119 5e-26
>ref|NP_565050.1| expressed protein; protein id: At1g72970.1, supported by cDNA:
gi_15809851 [Arabidopsis thaliana]
gi|11357160|pir||T50765 adhesion of calyx edges protein
ACE [imported] - Arabidopsis thaliana
gi|4903006|dbj|BAA77837.1| ACE [Arabidopsis thaliana]
gi|5903086|gb|AAD55644.1|AC008017_17 ACE [Arabidopsis
thaliana] gi|15809852|gb|AAL06854.1| At1g72970/F3N23_17
[Arabidopsis thaliana] gi|27363290|gb|AAO11564.1|
At1g72970/F3N23_17 [Arabidopsis thaliana]
Length = 594
Score = 150 bits (379), Expect(2) = 2e-36
Identities = 69/88 (78%), Positives = 75/88 (84%)
Frame = -1
Query: 807 PSMANDTKSLEQFCKDTVITIWHYHGGCHVAKVVSPEHMVLGVERLRVVDGSTFSESPGT 628
P NDTKS+ QFCKDTV+TIWHYHGGC V KVVSP VLGV+RLRV+DGSTF ESPGT
Sbjct: 507 PKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGT 566
Query: 627 NPQATVMMMGRYMGVKILRHRLGKLAGI 544
NPQAT+MMMGRYMGVKILR RLG AG+
Sbjct: 567 NPQATMMMMGRYMGVKILRERLGNKAGV 594
Score = 25.0 bits (53), Expect(2) = 2e-36
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -3
Query: 871 CKRTPTEDLLDLSLKANVHLIPK 803
C + +L LS+KAN++L PK
Sbjct: 486 CDKQNVHKMLSLSVKANINLRPK 508
>pir||T50764 adhesion of calyx edges protein ACE [imported] - Arabidopsis
thaliana gi|4903018|dbj|BAA77842.1| ACE [Arabidopsis
thaliana]
Length = 594
Score = 150 bits (379), Expect(2) = 2e-36
Identities = 69/88 (78%), Positives = 75/88 (84%)
Frame = -1
Query: 807 PSMANDTKSLEQFCKDTVITIWHYHGGCHVAKVVSPEHMVLGVERLRVVDGSTFSESPGT 628
P NDTKS+ QFCKDTV+TIWHYHGGC V KVVSP VLGV+RLRV+DGSTF ESPGT
Sbjct: 507 PKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGT 566
Query: 627 NPQATVMMMGRYMGVKILRHRLGKLAGI 544
NPQAT+MMMGRYMGVKILR RLG AG+
Sbjct: 567 NPQATMMMMGRYMGVKILRERLGNKAGV 594
Score = 25.0 bits (53), Expect(2) = 2e-36
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = -3
Query: 871 CKRTPTEDLLDLSLKANVHLIPK 803
C + +L LS+KAN++L PK
Sbjct: 486 CDKQNVHKMLSLSVKANINLRPK 508
>gb|AAO15286.1| Putative mandelonitrile lyase [Oryza sativa (japonica
cultivar-group)]
Length = 590
Score = 121 bits (304), Expect = 1e-26
Identities = 54/81 (66%), Positives = 65/81 (79%)
Frame = -1
Query: 807 PSMANDTKSLEQFCKDTVITIWHYHGGCHVAKVVSPEHMVLGVERLRVVDGSTFSESPGT 628
P A DT+ L+Q+C++TV+TIWHYHGGCHV VV ++ VLGV LRVVD STF SPGT
Sbjct: 502 PRRATDTRPLQQYCRETVMTIWHYHGGCHVGAVVDQDYRVLGVRGLRVVDSSTFKYSPGT 561
Query: 627 NPQATVMMMGRYMGVKILRHR 565
NPQATVMM+GRYMG+KI + R
Sbjct: 562 NPQATVMMLGRYMGLKIQKER 582
>gb|AAO00719.1| putative mandelonitrile lyase [Oryza sativa (japonica
cultivar-group)]
Length = 586
Score = 120 bits (301), Expect = 3e-26
Identities = 55/84 (65%), Positives = 64/84 (75%)
Frame = -1
Query: 807 PSMANDTKSLEQFCKDTVITIWHYHGGCHVAKVVSPEHMVLGVERLRVVDGSTFSESPGT 628
P ND++S EQ+C DTV+TIWHYHGGCHV VV ++ V GV+ LRV+D STF SPGT
Sbjct: 503 PRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYRVFGVQGLRVIDSSTFKYSPGT 562
Query: 627 NPQATVMMMGRYMGVKILRHRLGK 556
NPQATVMM+GRYMGVKI R K
Sbjct: 563 NPQATVMMLGRYMGVKIQSERWKK 586
>pir||T50698 probable mandelonitrile lyase (EC 4.1.2.10) [imported] - rice
gi|7649261|gb|AAF65820.1|AF251031_1 putative
mandelonitrile lyase [Oryza sativa]
Length = 589
Score = 119 bits (299), Expect = 5e-26
Identities = 55/84 (65%), Positives = 63/84 (74%)
Frame = -1
Query: 807 PSMANDTKSLEQFCKDTVITIWHYHGGCHVAKVVSPEHMVLGVERLRVVDGSTFSESPGT 628
P ND++S EQ+C DTV+TIWHYHGGCHV VV ++ V GV LRV+D STF SPGT
Sbjct: 506 PRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYRVFGVHGLRVIDSSTFKYSPGT 565
Query: 627 NPQATVMMMGRYMGVKILRHRLGK 556
NPQATVMM+GRYMGVKI R K
Sbjct: 566 NPQATVMMLGRYMGVKIQSERWKK 589
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 767,508,908
Number of Sequences: 1393205
Number of extensions: 17486214
Number of successful extensions: 45114
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 41959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44709
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46824663816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
