Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011519A_C01 KMC011519A_c01
(589 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197430.1| phospholipase - like protein; protein id: At5g1... 133 2e-49
ref|NP_197002.1| lysophospholipase -like protein; protein id: At... 134 7e-47
dbj|BAB62599.1| B1153F04.5 [Oryza sativa (japonica cultivar-grou... 146 2e-34
ref|NP_565905.2| putative phospholipase; protein id: At2g39410.2... 101 7e-25
pir||T00551 lysophospholipase homolog F12L6.7 - Arabidopsis thal... 101 7e-25
>ref|NP_197430.1| phospholipase - like protein; protein id: At5g19290.1, supported by
cDNA: 253499., supported by cDNA: gi_17380667
[Arabidopsis thaliana] gi|17380668|gb|AAL36164.1|
putative phospholipase [Arabidopsis thaliana]
gi|21554372|gb|AAM63479.1| phospholipase-like protein
[Arabidopsis thaliana] gi|23397199|gb|AAN31882.1|
putative phospholipase [Arabidopsis thaliana]
gi|26983896|gb|AAN86200.1| putative phospholipase
[Arabidopsis thaliana]
Length = 330
Score = 133 bits (335), Expect(2) = 2e-49
Identities = 60/94 (63%), Positives = 76/94 (80%), Gaps = 6/94 (6%)
Frame = -1
Query: 436 LLRICRELQGRYEEVEVPFLVAHGGDDVVCDPACVEELYSRAASKDKTLKIYPGMWHQLV 257
L+R+C++LQGR+EEVEVP L+ HGG DVVCD ACVEEL+ RA S+DKT+KIYP +WHQ++
Sbjct: 236 LIRVCKDLQGRFEEVEVPLLIVHGGGDVVCDVACVEELHRRAISEDKTIKIYPELWHQMI 295
Query: 256 GEPQENVELVFGDMLEWLRK------RAAVGGGA 173
GE +E V+LV+GDML WL+ RAAV GGA
Sbjct: 296 GESEEKVDLVYGDMLSWLKSRAERKARAAVDGGA 329
Score = 84.7 bits (208), Expect(2) = 2e-49
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = -3
Query: 587 IAAAIIPTWRVVPTRGSIPEVSFKVEWKRKLAMASPRRTVARPRASTAQD 438
+ A +IPTWRV+PTRGSIP+VSFK WKRKLAMASPRRTVA+PRA+TA +
Sbjct: 186 VVANLIPTWRVIPTRGSIPDVSFKEPWKRKLAMASPRRTVAKPRAATAYE 235
>ref|NP_197002.1| lysophospholipase -like protein; protein id: At5g14980.1
[Arabidopsis thaliana] gi|11358495|pir||T51443
lysophospholipase-like protein - Arabidopsis thaliana
gi|9755665|emb|CAC01817.1| lysophospholipase-like
protein [Arabidopsis thaliana]
Length = 327
Score = 134 bits (336), Expect(2) = 7e-47
Identities = 55/84 (65%), Positives = 73/84 (86%)
Frame = -1
Query: 436 LLRICRELQGRYEEVEVPFLVAHGGDDVVCDPACVEELYSRAASKDKTLKIYPGMWHQLV 257
L+R+C +LQ R+EEVEVP ++ HG DDVVCDPA VEELY R +S+DKT+KIYPGMWHQL+
Sbjct: 235 LVRVCEDLQNRFEEVEVPLMIVHGRDDVVCDPASVEELYRRCSSRDKTIKIYPGMWHQLI 294
Query: 256 GEPQENVELVFGDMLEWLRKRAAV 185
GE +ENV+LVFGD+L+W++ R+ +
Sbjct: 295 GESEENVDLVFGDVLDWIKTRSEI 318
Score = 75.5 bits (184), Expect(2) = 7e-47
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = -3
Query: 587 IAAAIIPTWRVVPTRGSIPEVSFKVEWKRKLAMASPRRTVARPRASTAQD 438
+AA +IPTWRVVPTRGSI VSFK WKRKLA A+P RTV +PRA+TA +
Sbjct: 185 LAATLIPTWRVVPTRGSIAGVSFKEPWKRKLAYANPNRTVGKPRAATAYE 234
>dbj|BAB62599.1| B1153F04.5 [Oryza sativa (japonica cultivar-group)]
gi|21104852|dbj|BAB93436.1| P0028G04.16 [Oryza sativa
(japonica cultivar-group)]
Length = 329
Score = 146 bits (368), Expect = 2e-34
Identities = 67/103 (65%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Frame = -1
Query: 466 RVHAPPLRRT---LLRICRELQGRYEEVEVPFLVAHGGDDVVCDPACVEELYSRAASKDK 296
R APP T LLR+CRELQ R+EEVE+P LV HGG+D VCDP C EEL+ RA SKDK
Sbjct: 223 RTTAPPRAATALELLRVCRELQSRFEEVELPLLVVHGGEDTVCDPGCAEELHRRAGSKDK 282
Query: 295 TLKIYPGMWHQLVGEPQENVELVFGDMLEWLRKRAAVGGGA*G 167
TL++YPGMWHQLVGEP+ENV+ VFGD+L+WL+ AA A G
Sbjct: 283 TLRVYPGMWHQLVGEPEENVDKVFGDVLDWLKSHAAAAAAARG 325
Score = 70.5 bits (171), Expect = 2e-11
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -3
Query: 584 AAAIIPTWRVVPTRGSIPEVSFKVEWKRKLAMASPRRTVARPRASTA 444
AAA+ PTWR+ TRG+IP+ SFKV WKR LA+ASPRRT A PRA+TA
Sbjct: 187 AAAVAPTWRLAFTRGNIPDRSFKVPWKRALAVASPRRTTAPPRAATA 233
>ref|NP_565905.2| putative phospholipase; protein id: At2g39410.2 [Arabidopsis
thaliana] gi|20197113|gb|AAC27832.2| putative
phospholipase; alternative splicing isoform [Arabidopsis
thaliana]
Length = 317
Score = 101 bits (251), Expect(2) = 7e-25
Identities = 49/86 (56%), Positives = 61/86 (69%), Gaps = 1/86 (1%)
Frame = -1
Query: 436 LLRICRELQGRYEEVEVPFLVAHGGDDVVCDPACVEELYSRAASKDKTLKIYPGMWHQLV 257
LLRI +L+ R +EV +PFLV HG DD V D A +ELY A S DKTLK+YPGMWH L+
Sbjct: 213 LLRISNDLEKRLQEVSLPFLVLHGDDDKVTDKAVSQELYKVALSADKTLKLYPGMWHGLL 272
Query: 256 -GEPQENVELVFGDMLEWLRKRAAVG 182
GE EN+E+VF D++ WL KR+ G
Sbjct: 273 TGETPENIEIVFADVISWLEKRSDYG 298
Score = 34.3 bits (77), Expect(2) = 7e-25
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 578 AIIPTWRVVPTRGSIPEVSFKVEWKRKLAMASPRRTVARPRASTAQD 438
+IIP W+++P++ I E+S+K RK +P + RPR TA +
Sbjct: 167 SIIPKWKIIPSQDII-EISYKEPEIRKQVRENPLCSKGRPRLKTAYE 212
>pir||T00551 lysophospholipase homolog F12L6.7 - Arabidopsis thaliana
Length = 311
Score = 101 bits (251), Expect(2) = 7e-25
Identities = 49/86 (56%), Positives = 61/86 (69%), Gaps = 1/86 (1%)
Frame = -1
Query: 436 LLRICRELQGRYEEVEVPFLVAHGGDDVVCDPACVEELYSRAASKDKTLKIYPGMWHQLV 257
LLRI +L+ R +EV +PFLV HG DD V D A +ELY A S DKTLK+YPGMWH L+
Sbjct: 207 LLRISNDLEKRLQEVSLPFLVLHGDDDKVTDKAVSQELYKVALSADKTLKLYPGMWHGLL 266
Query: 256 -GEPQENVELVFGDMLEWLRKRAAVG 182
GE EN+E+VF D++ WL KR+ G
Sbjct: 267 TGETPENIEIVFADVISWLEKRSDYG 292
Score = 34.3 bits (77), Expect(2) = 7e-25
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 578 AIIPTWRVVPTRGSIPEVSFKVEWKRKLAMASPRRTVARPRASTAQD 438
+IIP W+++P++ I E+S+K RK +P + RPR TA +
Sbjct: 161 SIIPKWKIIPSQDII-EISYKEPEIRKQVRENPLCSKGRPRLKTAYE 206
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 581,234,950
Number of Sequences: 1393205
Number of extensions: 15095754
Number of successful extensions: 121343
Number of sequences better than 10.0: 1129
Number of HSP's better than 10.0 without gapping: 77107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109311
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
