Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011495A_C01 KMC011495A_c01
(644 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175266.1| hypothetical protein; protein id: At1g48320.1 [... 187 8e-47
ref|NP_199706.1| putative protein; protein id: At5g48950.1 [Arab... 152 3e-36
ref|ZP_00063273.1| hypothetical protein [Leuconostoc mesenteroid... 69 4e-11
ref|NP_439319.1| conserved hypothetical protein [Haemophilus inf... 66 3e-10
gb|AAL67542.1|AF459919_8 YuxO protein [Bacillus licheniformis] 63 3e-09
>ref|NP_175266.1| hypothetical protein; protein id: At1g48320.1 [Arabidopsis
thaliana] gi|25405264|pir||B96523 F11A17.13 [imported] -
Arabidopsis thaliana
gi|5733877|gb|AAD49765.1|AC007932_13 F11A17.13
[Arabidopsis thaliana]
Length = 156
Score = 187 bits (476), Expect = 8e-47
Identities = 89/124 (71%), Positives = 107/124 (85%)
Frame = -2
Query: 643 RLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRVAGIQLSINHLKRAELGDLV 464
RLP++ CCQPFKVLHGGVSA+IAESLASMGAHMASG++RVAGIQLSINHLK A+LGDLV
Sbjct: 33 RLPVSPVCCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGIQLSINHLKSADLGDLV 92
Query: 463 HAEATPLNVGKTVQVWEVTIWKIDPSNLQNRSLVSSSRVTLICNMPVPDHAKEAGQLLKK 284
AEATP++ GKT+QVWEV +WK + N+ L+SSSRVTLICN+P+PD+AK+A +LK
Sbjct: 93 FAEATPVSTGKTIQVWEVKLWKTTQKDKANKILISSSRVTLICNLPIPDNAKDAANMLKM 152
Query: 283 YAKL 272
AKL
Sbjct: 153 VAKL 156
>ref|NP_199706.1| putative protein; protein id: At5g48950.1 [Arabidopsis thaliana]
gi|10177184|dbj|BAB10318.1|
gb|AAD49765.1~gene_id:K19E20.6~similar to unknown
protein [Arabidopsis thaliana]
Length = 157
Score = 152 bits (385), Expect = 3e-36
Identities = 73/120 (60%), Positives = 96/120 (79%), Gaps = 1/120 (0%)
Frame = -2
Query: 640 LPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRVAGIQLSINHLKRAELGDLVH 461
L +T KCCQPFKVLHGGVSA+IAE+LAS+GA +ASG++RVAGI LSI+HL+ A LG++V
Sbjct: 33 LTLTEKCCQPFKVLHGGVSALIAEALASLGAGIASGFKRVAGIHLSIHHLRPAALGEIVF 92
Query: 460 AEATPLNVGKTVQVWEVTIWKIDPSNL-QNRSLVSSSRVTLICNMPVPDHAKEAGQLLKK 284
AE+ P++VGK +QVWEV +WK + N+ +VS+SRVTL C +P+PDH K+A LKK
Sbjct: 93 AESFPVSVGKNIQVWEVRLWKAKKTETPDNKIMVSTSRVTLFCGLPIPDHVKDAPDELKK 152
>ref|ZP_00063273.1| hypothetical protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 124
Score = 69.3 bits (168), Expect = 4e-11
Identities = 42/101 (41%), Positives = 63/101 (61%), Gaps = 1/101 (0%)
Frame = -2
Query: 640 LPITLKCCQPFKVLHGGVSAMIAESLASMGAHMA-SGYQRVAGIQLSINHLKRAELGDLV 464
L +T K QP+ ++HGG++A++AE+ AS+GA A S Q G+ + +HLK G L+
Sbjct: 23 LAVTDKIMQPYGIVHGGINALLAETAASLGAKEALSDNQFPVGVDIQTHHLKPVSKGILI 82
Query: 463 HAEATPLNVGKTVQVWEVTIWKIDPSNLQNRSLVSSSRVTL 341
A ATP+N+G ++QVW V I N+ N+ L S + VTL
Sbjct: 83 -ATATPVNIGHSLQVWHVKI----TENITNQ-LTSIATVTL 117
>ref|NP_439319.1| conserved hypothetical protein [Haemophilus influenzae Rd]
gi|1175557|sp|P45083|YB61_HAEIN Hypothetical protein
HI1161 gi|1073773|pir||A64187 conserved hypothetical
protein HI1161 - Haemophilus influenzae (strain Rd KW20)
gi|1574088|gb|AAC22816.1| conserved hypothetical protein
[Haemophilus influenzae Rd]
Length = 138
Score = 66.2 bits (160), Expect = 3e-10
Identities = 37/101 (36%), Positives = 58/101 (56%), Gaps = 1/101 (0%)
Frame = -2
Query: 640 LPITLKCCQPFKVLHGGVSAMIAESLASM-GAHMASGYQRVAGIQLSINHLKRAELGDLV 464
+P+ + QPF VLHGGVS +AE++ S+ G+ + V G+ ++ NHL+ G V
Sbjct: 40 MPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK-V 98
Query: 463 HAEATPLNVGKTVQVWEVTIWKIDPSNLQNRSLVSSSRVTL 341
A ATP+N+G+ +QVW++ I + L SR+TL
Sbjct: 99 TARATPINLGRNIQVWQIDI------RTEENKLCCVSRLTL 133
>gb|AAL67542.1|AF459919_8 YuxO protein [Bacillus licheniformis]
Length = 129
Score = 63.2 bits (152), Expect = 3e-09
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = -2
Query: 640 LPITLKCCQPFKVLHGGVSAMIAESLASMGA--HMASGYQRVAGIQLSINHLKRAELGDL 467
+P+ + QPF LHGG S +AE++AS+GA H+ Q G++++ NH+K + G
Sbjct: 27 MPVDERTRQPFGYLHGGASVALAETVASIGAYQHIDPKEQACFGLEINANHIKSVKDG-T 85
Query: 466 VHAEATPLNVGKTVQVWEVTIWKIDPSNLQNRSLVSSSRVTL 341
V A ATPL+VGK+ V+++ I + SL+ +SR T+
Sbjct: 86 VKAVATPLHVGKSTMVFQIDI------RDEQDSLICTSRCTM 121
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,732,038
Number of Sequences: 1393205
Number of extensions: 11699901
Number of successful extensions: 25029
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 24243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24962
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
