Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011490A_C01 KMC011490A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA76902.1| cycloartenol synthase [Glycyrrhiza glabra] 199 4e-55
dbj|BAB83086.1| cycloartenol synthase [Betula platyphylla] 189 1e-53
dbj|BAB83085.1| cycloartenol synthase [Betula platyphylla] 177 8e-50
pir||JC5590 cycloartenol synthase (EC 5.4.99.8) - garden pea gi|... 196 3e-49
dbj|BAA85266.1| cycloartenol synthase [Luffa cylindrica] 170 5e-48
>dbj|BAA76902.1| cycloartenol synthase [Glycyrrhiza glabra]
Length = 757
Score = 199 bits (507), Expect(2) = 4e-55
Identities = 94/106 (88%), Positives = 98/106 (91%)
Frame = -3
Query: 630 SIRKACEFLLSKQLPSGGWGESYLSCQNKVYSNLEGNRPHAVNTGWAMLALIEAEQAKRD 451
SIRKACEFLLSKQLPSGGWGESYLSCQNKVYSN+E NR H VNTGWAMLALI+AEQAKRD
Sbjct: 637 SIRKACEFLLSKQLPSGGWGESYLSCQNKVYSNVESNRSHVVNTGWAMLALIDAEQAKRD 696
Query: 450 PTPLHRAALYLINSQMENGDFPHQEIMGVFNQNCMITYAAYTEHIP 313
PTPLHRAA+YLINSQMENGDFP QEIMGVFN+NCMITYAAY P
Sbjct: 697 PTPLHRAAVYLINSQMENGDFPQQEIMGVFNKNCMITYAAYRNVFP 742
Score = 37.4 bits (85), Expect(2) = 4e-55
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -1
Query: 326 RSIFPIWALGEYRCRVLQAR 267
R++FPIWALGEYR RVLQ++
Sbjct: 738 RNVFPIWALGEYRHRVLQSQ 757
>dbj|BAB83086.1| cycloartenol synthase [Betula platyphylla]
Length = 757
Score = 189 bits (479), Expect(2) = 1e-53
Identities = 89/105 (84%), Positives = 95/105 (89%)
Frame = -3
Query: 627 IRKACEFLLSKQLPSGGWGESYLSCQNKVYSNLEGNRPHAVNTGWAMLALIEAEQAKRDP 448
IRKAC+FLLSKQLPSGGWGESYLSCQNKVYS++EGNR H VNTGWAMLALIEA QA+RDP
Sbjct: 638 IRKACDFLLSKQLPSGGWGESYLSCQNKVYSHVEGNRSHVVNTGWAMLALIEAGQAERDP 697
Query: 447 TPLHRAALYLINSQMENGDFPHQEIMGVFNQNCMITYAAYTEHIP 313
TPLHRAA LINSQMENGDFP +EIMGVFN+NCMITYAAY P
Sbjct: 698 TPLHRAARVLINSQMENGDFPQEEIMGVFNRNCMITYAAYRNIFP 742
Score = 43.1 bits (100), Expect(2) = 1e-53
Identities = 18/19 (94%), Positives = 19/19 (99%)
Frame = -1
Query: 326 RSIFPIWALGEYRCRVLQA 270
R+IFPIWALGEYRCRVLQA
Sbjct: 738 RNIFPIWALGEYRCRVLQA 756
>dbj|BAB83085.1| cycloartenol synthase [Betula platyphylla]
Length = 767
Score = 177 bits (450), Expect(2) = 8e-50
Identities = 82/106 (77%), Positives = 94/106 (88%)
Frame = -3
Query: 630 SIRKACEFLLSKQLPSGGWGESYLSCQNKVYSNLEGNRPHAVNTGWAMLALIEAEQAKRD 451
SI KAC++LLSK+L SGGWGESYLSCQ+KVY+NL+ NRPH VNTGWAMLALI+A QA+RD
Sbjct: 647 SIHKACDYLLSKELASGGWGESYLSCQDKVYTNLKDNRPHIVNTGWAMLALIDAGQAERD 706
Query: 450 PTPLHRAALYLINSQMENGDFPHQEIMGVFNQNCMITYAAYTEHIP 313
PTPLHRAA LINSQMENGDFP +EIMGVFN+NCMI+Y+AY P
Sbjct: 707 PTPLHRAARILINSQMENGDFPQEEIMGVFNKNCMISYSAYRNIFP 752
Score = 41.6 bits (96), Expect(2) = 8e-50
Identities = 17/19 (89%), Positives = 19/19 (99%)
Frame = -1
Query: 326 RSIFPIWALGEYRCRVLQA 270
R+IFPIWALGEYRCRVL+A
Sbjct: 748 RNIFPIWALGEYRCRVLKA 766
>pir||JC5590 cycloartenol synthase (EC 5.4.99.8) - garden pea
gi|2627181|dbj|BAA23533.1| cycloartenol synthase [Pisum
sativum]
Length = 756
Score = 196 bits (497), Expect = 3e-49
Identities = 96/120 (80%), Positives = 103/120 (85%), Gaps = 3/120 (2%)
Frame = -3
Query: 630 SIRKACEFLLSKQLPSGGWGESYLSCQNKVYSNLEGNRPHAVNTGWAMLALIEAEQAKRD 451
SIRKACEFLLSKQLPSGGW ESYLSCQNKVYSNLEGNR H VNTGWAMLALIEAEQAKRD
Sbjct: 637 SIRKACEFLLSKQLPSGGWAESYLSCQNKVYSNLEGNRSHVVNTGWAMLALIEAEQAKRD 696
Query: 450 PTPLHRAALYLINSQMENGDFPHQEIMGVFNQNCMITYAAYTEHIPHMGV---RRIPMSC 280
PTPLHRAA+ LINSQ+ENGDFP +EIMGVFN+NCMITYAAY P + RR+ +C
Sbjct: 697 PTPLHRAAVCLINSQLENGDFPQEEIMGVFNKNCMITYAAYRCIFPIWALGEYRRVLQAC 756
>dbj|BAA85266.1| cycloartenol synthase [Luffa cylindrica]
Length = 765
Score = 170 bits (430), Expect(2) = 5e-48
Identities = 77/106 (72%), Positives = 94/106 (88%)
Frame = -3
Query: 630 SIRKACEFLLSKQLPSGGWGESYLSCQNKVYSNLEGNRPHAVNTGWAMLALIEAEQAKRD 451
S+RKAC+FLLSK+L SGGWGESYLS QNKVY+N++ +RPH VNTGWAML+LI+A Q++RD
Sbjct: 645 SLRKACDFLLSKELASGGWGESYLSGQNKVYTNIKDDRPHIVNTGWAMLSLIDAGQSERD 704
Query: 450 PTPLHRAALYLINSQMENGDFPHQEIMGVFNQNCMITYAAYTEHIP 313
PTPLHRAA LINSQM++GDFP +EIMG+FN+NCMI+YAAY P
Sbjct: 705 PTPLHRAARILINSQMDDGDFPQEEIMGIFNKNCMISYAAYRNIFP 750
Score = 43.1 bits (100), Expect(2) = 5e-48
Identities = 18/19 (94%), Positives = 19/19 (99%)
Frame = -1
Query: 326 RSIFPIWALGEYRCRVLQA 270
R+IFPIWALGEYRCRVLQA
Sbjct: 746 RNIFPIWALGEYRCRVLQA 764
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 578,423,745
Number of Sequences: 1393205
Number of extensions: 12918443
Number of successful extensions: 27537
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 26457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27466
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
