Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011193A_C01 KMC011193A_c01
(600 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37375.1|AF145349_1 peroxidase [Glycine max] 229 3e-59
gb|AAL93153.1|AF485267_1 gaiacol peroxidase [Gossypium hirsutum] 205 3e-52
sp|Q9SZH2|PE43_ARATH Peroxidase 43 precursor (Atperox P43) 193 2e-48
ref|NP_194328.1| cationic peroxidase, putative; protein id: At4g... 193 2e-48
gb|AAF34416.1|AF172282_5 putative peroxidase [Oryza sativa] 137 1e-31
>gb|AAD37375.1|AF145349_1 peroxidase [Glycine max]
Length = 341
Score = 229 bits (583), Expect = 3e-59
Identities = 108/138 (78%), Positives = 124/138 (89%)
Frame = -1
Query: 600 TIGTTACFFMTKRLYDFFPPSGGSDPAINPNFLPQLKAKCPQHGNVNTRLAIDEGSEQRF 421
TIGTTACFFMT+RLY+FFP GSDPAI NFLP+LKA+CPQ+G+VN RLAIDEGSEQ+F
Sbjct: 204 TIGTTACFFMTRRLYNFFPSGEGSDPAIRQNFLPRLKARCPQNGDVNIRLAIDEGSEQKF 263
Query: 420 DKNILNNIRQGFAVLESDARLNDDIFTKAIIESYFGPLNPILGPSFEADFVEAIVKMGQI 241
D NIL NIR+GFAVLESDARLNDDI TK +I+SY P +P+ GPSFEADFVE++VKMGQI
Sbjct: 264 DINILKNIREGFAVLESDARLNDDIATKNVIDSYVSPFSPMFGPSFEADFVESVVKMGQI 323
Query: 240 GVKTGFLGDVRRVCSAFN 187
GVKTGFLG++RRVCSAFN
Sbjct: 324 GVKTGFLGEIRRVCSAFN 341
>gb|AAL93153.1|AF485267_1 gaiacol peroxidase [Gossypium hirsutum]
Length = 323
Score = 205 bits (522), Expect = 3e-52
Identities = 99/138 (71%), Positives = 119/138 (85%)
Frame = -1
Query: 600 TIGTTACFFMTKRLYDFFPPSGGSDPAINPNFLPQLKAKCPQHGNVNTRLAIDEGSEQRF 421
TIGTTACFFMTKRLY F P+GGSDPAI+P+FLPQL++ CPQ+G+VN RL +D GSE+ F
Sbjct: 187 TIGTTACFFMTKRLYKF-SPAGGSDPAISPDFLPQLQSICPQNGDVNVRLPMDRGSERTF 245
Query: 420 DKNILNNIRQGFAVLESDARLNDDIFTKAIIESYFGPLNPILGPSFEADFVEAIVKMGQI 241
DK IL+NIR GFAVLESDARL DD T+ +++SYFG L PI GPSFE+DFV++IVKMGQI
Sbjct: 246 DKQILDNIRNGFAVLESDARLYDDETTRMVVDSYFGILTPIFGPSFESDFVDSIVKMGQI 305
Query: 240 GVKTGFLGDVRRVCSAFN 187
GVKTG G++RRVC+AFN
Sbjct: 306 GVKTGSKGEIRRVCTAFN 323
>sp|Q9SZH2|PE43_ARATH Peroxidase 43 precursor (Atperox P43)
Length = 326
Score = 193 bits (490), Expect = 2e-48
Identities = 90/138 (65%), Positives = 112/138 (80%)
Frame = -1
Query: 600 TIGTTACFFMTKRLYDFFPPSGGSDPAINPNFLPQLKAKCPQHGNVNTRLAIDEGSEQRF 421
TIGTTACFFM+KRLYDF P G DP INP FLP+L +CPQ+G++N RL ID SE+ F
Sbjct: 190 TIGTTACFFMSKRLYDFLP-GGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLF 248
Query: 420 DKNILNNIRQGFAVLESDARLNDDIFTKAIIESYFGPLNPILGPSFEADFVEAIVKMGQI 241
DK IL NI+ GFAVL++DA L +D+ T+ +++SY G LNP GP+FE+DFV+AIVKMG+I
Sbjct: 249 DKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKI 308
Query: 240 GVKTGFLGDVRRVCSAFN 187
GVKTGF G++RRVCSAFN
Sbjct: 309 GVKTGFKGEIRRVCSAFN 326
>ref|NP_194328.1| cationic peroxidase, putative; protein id: At4g25980.1 [Arabidopsis
thaliana] gi|7433052|pir||T04253 peroxidase homolog
F20B18.90 - Arabidopsis thaliana
gi|4538927|emb|CAB39663.1| putative peroxidase
[Arabidopsis thaliana] gi|7269449|emb|CAB79453.1|
putative peroxidase [Arabidopsis thaliana]
Length = 371
Score = 193 bits (490), Expect = 2e-48
Identities = 90/138 (65%), Positives = 112/138 (80%)
Frame = -1
Query: 600 TIGTTACFFMTKRLYDFFPPSGGSDPAINPNFLPQLKAKCPQHGNVNTRLAIDEGSEQRF 421
TIGTTACFFM+KRLYDF P G DP INP FLP+L +CPQ+G++N RL ID SE+ F
Sbjct: 235 TIGTTACFFMSKRLYDFLP-GGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLF 293
Query: 420 DKNILNNIRQGFAVLESDARLNDDIFTKAIIESYFGPLNPILGPSFEADFVEAIVKMGQI 241
DK IL NI+ GFAVL++DA L +D+ T+ +++SY G LNP GP+FE+DFV+AIVKMG+I
Sbjct: 294 DKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKI 353
Query: 240 GVKTGFLGDVRRVCSAFN 187
GVKTGF G++RRVCSAFN
Sbjct: 354 GVKTGFKGEIRRVCSAFN 371
>gb|AAF34416.1|AF172282_5 putative peroxidase [Oryza sativa]
Length = 334
Score = 137 bits (345), Expect = 1e-31
Identities = 70/140 (50%), Positives = 94/140 (67%), Gaps = 2/140 (1%)
Frame = -1
Query: 600 TIGTTACFFMTKRLYDFFPPSGG--SDPAINPNFLPQLKAKCPQHGNVNTRLAIDEGSEQ 427
T+GTTACFF+ RLY+F GG +DP+I FL +L+++C G+ NTRL +D GSE
Sbjct: 196 TVGTTACFFLQDRLYNFPLAGGGRGADPSIPEAFLSELQSRCAP-GDFNTRLPLDRGSEA 254
Query: 426 RFDKNILNNIRQGFAVLESDARLNDDIFTKAIIESYFGPLNPILGPSFEADFVEAIVKMG 247
FD +IL NIR GFAV+ SDA L + T ++++Y L+ GP F DF +A+VKMG
Sbjct: 255 EFDTSILRNIRNGFAVIASDAALYNATATVGVVDTYSSMLSAFFGPYFRQDFADAMVKMG 314
Query: 246 QIGVKTGFLGDVRRVCSAFN 187
+GV TG G+VR+VCS FN
Sbjct: 315 SVGVLTGAAGEVRKVCSKFN 334
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 508,262,956
Number of Sequences: 1393205
Number of extensions: 10307088
Number of successful extensions: 30824
Number of sequences better than 10.0: 386
Number of HSP's better than 10.0 without gapping: 29665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30499
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
