Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011105A_C01 KMC011105A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA74900.1| anthranilate synthase alpha subunit 153 1e-36
ref|NP_180530.1| anthranilate synthase, alpha subunit; protein i... 150 1e-35
pir||JQ1685 anthranilate synthase (EC 4.1.3.27) alpha-2 chain - ... 147 1e-34
dbj|BAA82094.1| anthranilate synthase alpha 1 subunit [Oryza sat... 146 2e-34
gb|AAK82452.1|AC091247_19 anthranilate synthase alpha 1 subunit ... 146 2e-34
>gb|AAA74900.1| anthranilate synthase alpha subunit
Length = 608
Score = 153 bits (386), Expect = 1e-36
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = -2
Query: 540 GFGGISFSGDMDIALALRTIVFPTHTRFDTMYSYKDVN*RREWVAHLQAGAGIVADSKPD 361
GFGGISF+GD+DIALALRT+VF T TR+DTMYSYKDV+ RREW+AHLQAGAGIVADS P
Sbjct: 522 GFGGISFTGDLDIALALRTMVFQTATRYDTMYSYKDVDKRREWIAHLQAGAGIVADSDPA 581
Query: 360 DEQRECENKAAALARALDLAESSFIEK 280
DEQRECENKAAALARA+DLAESSFIEK
Sbjct: 582 DEQRECENKAAALARAIDLAESSFIEK 608
>ref|NP_180530.1| anthranilate synthase, alpha subunit; protein id: At2g29690.1
[Arabidopsis thaliana] gi|418134|sp|P32069|TRPX_ARATH
Anthranilate synthase component I-2, chloroplast
precursor gi|282854|pir||S27752 anthranilate synthase
(EC 4.1.3.27) alpha chain - Arabidopsis thaliana
gi|166606|gb|AAA32739.1| anthranilate synthase alpha
subunit gi|3582331|gb|AAC35228.1| anthranilate synthase,
alpha subunit [Arabidopsis thaliana]
Length = 621
Score = 150 bits (378), Expect = 1e-35
Identities = 71/86 (82%), Positives = 80/86 (92%)
Frame = -2
Query: 540 GFGGISFSGDMDIALALRTIVFPTHTRFDTMYSYKDVN*RREWVAHLQAGAGIVADSKPD 361
GFGGISF+GDMDIALALRT+VFPT+TR+DT+YSYK RREW+AH+QAGAGIVADS PD
Sbjct: 522 GFGGISFNGDMDIALALRTMVFPTNTRYDTLYSYKHPQRRREWIAHIQAGAGIVADSNPD 581
Query: 360 DEQRECENKAAALARALDLAESSFIE 283
DE RECENKAAALARA+DLAESSF+E
Sbjct: 582 DEHRECENKAAALARAIDLAESSFLE 607
>pir||JQ1685 anthranilate synthase (EC 4.1.3.27) alpha-2 chain - Arabidopsis
thaliana
Length = 621
Score = 147 bits (370), Expect = 1e-34
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = -2
Query: 540 GFGGISFSGDMDIALALRTIVFPTHTRFDTMYSYKDVN*RREWVAHLQAGAGIVADSKPD 361
GFGGISF+GDMDIALALRT+VFPT+TR+DT+YSYK RREW+AH+QAGAGIVADS PD
Sbjct: 522 GFGGISFNGDMDIALALRTMVFPTNTRYDTLYSYKHPQRRREWIAHIQAGAGIVADSNPD 581
Query: 360 DEQRECENKAAALARALDLAESSFIE 283
DE REC NKAAALARA+DLAESSF+E
Sbjct: 582 DEHRECFNKAAALARAIDLAESSFLE 607
>dbj|BAA82094.1| anthranilate synthase alpha 1 subunit [Oryza sativa (japonica
cultivar-group)]
Length = 577
Score = 146 bits (368), Expect = 2e-34
Identities = 70/87 (80%), Positives = 79/87 (90%)
Frame = -2
Query: 540 GFGGISFSGDMDIALALRTIVFPTHTRFDTMYSYKDVN*RREWVAHLQAGAGIVADSKPD 361
GFGG+SF GDMDIALALRTIVFPT +RFDTMYSY D N R+EWVAHLQAGAGIVADSKPD
Sbjct: 491 GFGGVSFRGDMDIALALRTIVFPTGSRFDTMYSYTDKNARQEWVAHLQAGAGIVADSKPD 550
Query: 360 DEQRECENKAAALARALDLAESSFIEK 280
DE +EC NKAA LARA+DLAES+F+++
Sbjct: 551 DEHQECLNKAAGLARAIDLAESTFVDE 577
>gb|AAK82452.1|AC091247_19 anthranilate synthase alpha 1 subunit [Oryza sativa]
gi|18855065|gb|AAL79757.1|AC096687_21 anthranilate
synthase alpha 1 subunit [Oryza sativa]
Length = 577
Score = 146 bits (368), Expect = 2e-34
Identities = 70/87 (80%), Positives = 79/87 (90%)
Frame = -2
Query: 540 GFGGISFSGDMDIALALRTIVFPTHTRFDTMYSYKDVN*RREWVAHLQAGAGIVADSKPD 361
GFGG+SF GDMDIALALRTIVFPT +RFDTMYSY D N R+EWVAHLQAGAGIVADSKPD
Sbjct: 491 GFGGVSFRGDMDIALALRTIVFPTGSRFDTMYSYTDKNARQEWVAHLQAGAGIVADSKPD 550
Query: 360 DEQRECENKAAALARALDLAESSFIEK 280
DE +EC NKAA LARA+DLAES+F+++
Sbjct: 551 DEHQECLNKAAGLARAIDLAESTFVDE 577
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,914,624
Number of Sequences: 1393205
Number of extensions: 10170753
Number of successful extensions: 24917
Number of sequences better than 10.0: 265
Number of HSP's better than 10.0 without gapping: 24045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24814
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
