Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010972A_C01 KMC010972A_c01
(479 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O23826|K125_TOBAC 125 kDa kinesin-related protein gi|7441387|... 55 2e-16
ref|NP_181162.1| kinesin-related protein; protein id: At2g36200.... 48 7e-11
gb|AAK91818.1|AF272755_1 kinesin heavy chain [Zea mays] 51 5e-10
gb|EAA16573.1| hypothetical protein [Plasmodium yoelii yoelii] 37 0.085
ref|XP_145210.1| similar to plexin 2 [Mus musculus] 32 2.7
>sp|O23826|K125_TOBAC 125 kDa kinesin-related protein gi|7441387|pir||T02017
kinesin-related protein TKRP125 - common tobacco
gi|2582971|dbj|BAA23159.1| TKRP125 [Nicotiana tabacum]
Length = 1006
Score = 54.7 bits (130), Expect(2) = 2e-16
Identities = 26/31 (83%), Positives = 27/31 (86%)
Frame = -3
Query: 477 GTTPIRSEPDVPSKGTIESLRTLPMETLLEE 385
G TPIRSEPDVPSK TIESLR +PME LLEE
Sbjct: 946 GATPIRSEPDVPSKVTIESLRAMPMEVLLEE 976
Score = 51.6 bits (122), Expect(2) = 2e-16
Identities = 23/32 (71%), Positives = 27/32 (83%)
Frame = -1
Query: 392 LRNXRENHSYESFDVKELKPSLIPRSPLSQVN 297
L REN+S+ESF VKE+KPSLIPRSP SQ+N
Sbjct: 974 LEEFRENNSFESFQVKEVKPSLIPRSPFSQIN 1005
>ref|NP_181162.1| kinesin-related protein; protein id: At2g36200.1 [Arabidopsis
thaliana] gi|11132972|sp|P82266|K125_ARATH Probable 125
kDa kinesin-related protein gi|25295721|pir||H84777
probable kinesin-related cytokinesis protein [imported] -
Arabidopsis thaliana gi|4510356|gb|AAD21445.1| putative
kinesin-related cytokinesis protein [Arabidopsis
thaliana]
Length = 1056
Score = 47.8 bits (112), Expect(2) = 7e-11
Identities = 19/31 (61%), Positives = 27/31 (86%)
Frame = -3
Query: 477 GTTPIRSEPDVPSKGTIESLRTLPMETLLEE 385
G TP ++EP++P+K TIESLR +P+ETL+EE
Sbjct: 950 GATPTKNEPEIPTKATIESLRAMPIETLVEE 980
Score = 39.7 bits (91), Expect(2) = 7e-11
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -1
Query: 380 RENHSYESFDVKELKPSLIPRSPLSQV 300
REN+SYESF KE KP + RSPLSQ+
Sbjct: 982 RENNSYESFATKETKPQQLTRSPLSQL 1008
>gb|AAK91818.1|AF272755_1 kinesin heavy chain [Zea mays]
Length = 1079
Score = 50.8 bits (120), Expect(2) = 5e-10
Identities = 21/31 (67%), Positives = 28/31 (89%)
Frame = -3
Query: 477 GTTPIRSEPDVPSKGTIESLRTLPMETLLEE 385
G TP+RSEP+VPSKG+IESLR +P+ET++ E
Sbjct: 1020 GETPVRSEPNVPSKGSIESLRAMPVETMMNE 1050
Score = 33.9 bits (76), Expect(2) = 5e-10
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 392 LRNXRENHSYESFDVKELKPSLIPRSPLSQVN 297
+ RENH YE KE K S IPR PL+ +N
Sbjct: 1048 MNEFRENHPYEHESSKESKLSQIPRLPLATIN 1079
>gb|EAA16573.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 452
Score = 37.4 bits (85), Expect = 0.085
Identities = 30/95 (31%), Positives = 46/95 (47%)
Frame = +2
Query: 131 LNHTTRSYVIGANND*YN*YNNNVTDTNSEMTRNKI*DKLRYCKGLVSKQVTNNFNLLG* 310
+NH + ++ NN+ N NNN D N+E+ +NK+ D +S TNNF +
Sbjct: 250 INHVSNNF---KNNNNANTINNNNFDNNNELNQNKLND-------TISMNATNNF-MNKK 298
Query: 311 GENEVLMMVSTP*HQKIHKNGFPXNSSRRVSIGNV 415
E + MV+ P I+ N F N+ SIG +
Sbjct: 299 MNKENISMVNYPMVNNINMNSFYMNNEN--SIGKI 331
>ref|XP_145210.1| similar to plexin 2 [Mus musculus]
Length = 783
Score = 32.3 bits (72), Expect = 2.7
Identities = 17/58 (29%), Positives = 25/58 (42%)
Frame = -2
Query: 211 CICNIVIVSIILVIVSPNHV*PSGMI*CKFMLSSAIPSWDLLVIICIFWQQWLVSLVL 38
C C + VS + P G + C + +WD L I+CI W +W+ L L
Sbjct: 561 CFCRLSTVSPGDSLSWEKEGLPHGTLRCVLLCRWQYDTWDALGILCILWLKWMRLLEL 618
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 391,178,892
Number of Sequences: 1393205
Number of extensions: 7725099
Number of successful extensions: 18425
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18371
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
