Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010838A_C01 KMC010838A_c01
(662 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC01184.1| P0485G01.18 [Oryza sativa (japonica cultivar-gro... 192 3e-48
gb|AAM98119.1| unknown protein [Arabidopsis thaliana] 191 8e-48
ref|NP_567072.1| putative protein; protein id: At3g58640.1, supp... 191 8e-48
pir||T45684 hypothetical protein F14P22.230 - Arabidopsis thalia... 191 8e-48
ref|NP_181791.1| putative protein kinase; protein id: At2g42630.... 155 6e-37
>dbj|BAC01184.1| P0485G01.18 [Oryza sativa (japonica cultivar-group)]
Length = 699
Score = 192 bits (489), Expect = 3e-48
Identities = 86/107 (80%), Positives = 100/107 (93%)
Frame = -1
Query: 662 TDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLKRPWLGVPPERVVY 483
TDSPM D+SSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTL RPW G+ P +VVY
Sbjct: 592 TDSPMTDNSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWDGISPVQVVY 651
Query: 482 SVAHEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSM 342
+VA+EGSRLEIPEGPLG+LI++CWAEP +RPSC+EIL+RL+D EY++
Sbjct: 652 TVANEGSRLEIPEGPLGKLIADCWAEPQDRPSCQEILTRLLDCEYAV 698
>gb|AAM98119.1| unknown protein [Arabidopsis thaliana]
Length = 809
Score = 191 bits (485), Expect = 8e-48
Identities = 85/107 (79%), Positives = 98/107 (91%)
Frame = -1
Query: 662 TDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLKRPWLGVPPERVVY 483
T + MRD+ SAGTPEWMAPELIRNEPF+EKCDIFSLGVIMWELCTL RPW GVPPERVVY
Sbjct: 702 TGTTMRDTVSAGTPEWMAPELIRNEPFSEKCDIFSLGVIMWELCTLTRPWEGVPPERVVY 761
Query: 482 SVAHEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSM 342
++A+EG+RLEIPEGPLG+LI++CW EP +RPSC EILSRL+D EYS+
Sbjct: 762 AIAYEGARLEIPEGPLGKLIADCWTEPEQRPSCNEILSRLLDCEYSL 808
>ref|NP_567072.1| putative protein; protein id: At3g58640.1, supported by cDNA:
gi_15146175 [Arabidopsis thaliana]
gi|15146176|gb|AAK83572.1| AT3g58640/F14P22_230
[Arabidopsis thaliana] gi|22655030|gb|AAM98106.1|
At3g58640/F14P22_230 [Arabidopsis thaliana]
Length = 809
Score = 191 bits (485), Expect = 8e-48
Identities = 85/107 (79%), Positives = 98/107 (91%)
Frame = -1
Query: 662 TDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLKRPWLGVPPERVVY 483
T + MRD+ SAGTPEWMAPELIRNEPF+EKCDIFSLGVIMWELCTL RPW GVPPERVVY
Sbjct: 702 TGTTMRDTVSAGTPEWMAPELIRNEPFSEKCDIFSLGVIMWELCTLTRPWEGVPPERVVY 761
Query: 482 SVAHEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSM 342
++A+EG+RLEIPEGPLG+LI++CW EP +RPSC EILSRL+D EYS+
Sbjct: 762 AIAYEGARLEIPEGPLGKLIADCWTEPEQRPSCNEILSRLLDCEYSL 808
>pir||T45684 hypothetical protein F14P22.230 - Arabidopsis thaliana
gi|6735381|emb|CAB68202.1| putative protein [Arabidopsis
thaliana]
Length = 816
Score = 191 bits (485), Expect = 8e-48
Identities = 85/107 (79%), Positives = 98/107 (91%)
Frame = -1
Query: 662 TDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLKRPWLGVPPERVVY 483
T + MRD+ SAGTPEWMAPELIRNEPF+EKCDIFSLGVIMWELCTL RPW GVPPERVVY
Sbjct: 709 TGTTMRDTVSAGTPEWMAPELIRNEPFSEKCDIFSLGVIMWELCTLTRPWEGVPPERVVY 768
Query: 482 SVAHEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSM 342
++A+EG+RLEIPEGPLG+LI++CW EP +RPSC EILSRL+D EYS+
Sbjct: 769 AIAYEGARLEIPEGPLGKLIADCWTEPEQRPSCNEILSRLLDCEYSL 815
>ref|NP_181791.1| putative protein kinase; protein id: At2g42630.1 [Arabidopsis
thaliana] gi|25408802|pir||C84856 probable protein
kinase [imported] - Arabidopsis thaliana
gi|4559329|gb|AAD22991.1| putative protein kinase
[Arabidopsis thaliana] gi|27524889|emb|CAC83101.1|
putative protein tyrosine kinase [Arabidopsis thaliana]
Length = 357
Score = 155 bits (391), Expect = 6e-37
Identities = 69/104 (66%), Positives = 87/104 (83%)
Frame = -1
Query: 662 TDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLKRPWLGVPPERVVY 483
T + ++D+ +AGTPEWMAPELIRNEP TEK DIFS GVIMWEL TL +PW GVP E+V++
Sbjct: 250 TGTAVKDTEAAGTPEWMAPELIRNEPVTEKSDIFSFGVIMWELSTLSKPWKGVPKEKVIH 309
Query: 482 SVAHEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIE 351
VA+EG+RL+IPEGPL +LI++CW+EP +RPSC+EIL RL E
Sbjct: 310 IVANEGARLKIPEGPLQKLIADCWSEPEQRPSCKEILHRLKTCE 353
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 593,227,668
Number of Sequences: 1393205
Number of extensions: 13351541
Number of successful extensions: 60579
Number of sequences better than 10.0: 5478
Number of HSP's better than 10.0 without gapping: 54783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58983
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28572683052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
