Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010833A_C01 KMC010833A_c01
(454 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08017 tetrafunctional protein precursor, glyoxysomal - rap... 81 6e-15
ref|NP_187342.1| fatty acid multifunctional protein (AtMFP2); pr... 79 2e-14
emb|CAA55910.1| protein MFP-b [Cucumis sativus] 69 2e-11
pir||T10464 fatty acid oxidation tetrafunctional protein, glyoxy... 69 2e-11
dbj|BAB63893.1| putative tetrafunctional protein of glyoxysomal ... 66 1e-10
>pir||T08017 tetrafunctional protein precursor, glyoxysomal - rape
gi|2832898|emb|CAA04386.1| Tetrafunctional protein of
glyoxysomal fatty acid beta-oxidation [Brassica napus]
Length = 725
Score = 80.9 bits (198), Expect = 6e-15
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 452 SLGSKYIYSRLDEWSKQYGEFFKPCPYLAARAAKGIPLSASLEQAQSRL 306
S+GSKYIYS+L+EWSK YGEFFKPC +LA R +KG PLSA LEQ++SRL
Sbjct: 677 SIGSKYIYSKLEEWSKAYGEFFKPCAFLAERGSKGAPLSAPLEQSRSRL 725
>ref|NP_187342.1| fatty acid multifunctional protein (AtMFP2); protein id:
At3g06860.1, supported by cDNA: gi_17065089, supported
by cDNA: gi_4337026 [Arabidopsis thaliana]
gi|4337027|gb|AAD18042.1| MFP2 [Arabidopsis thaliana]
gi|6728993|gb|AAF26990.1|AC016827_1 fatty acid
multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|17065090|gb|AAL32699.1| fatty acid multifunctional
protein (AtMFP2) [Arabidopsis thaliana]
Length = 725
Score = 79.3 bits (194), Expect = 2e-14
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -3
Query: 452 SLGSKYIYSRLDEWSKQYGEFFKPCPYLAARAAKGIPLSASLEQAQSRL 306
S+GSKYIYSRLDEWSK YGEFFKPC +LA R +KG+ LSA ++QA SRL
Sbjct: 677 SIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVKQASSRL 725
>emb|CAA55910.1| protein MFP-b [Cucumis sativus]
Length = 633
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = -3
Query: 452 SLGSKYIYSRLDEWSKQYGEFFKPCPYLAARAAKGIPLSASLEQAQSRL 306
SLGS YIYSRL+EWSKQYG FFKPC YLA RA +G LSA A+ R+
Sbjct: 585 SLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATLSAPGGHAKPRM 633
>pir||T10464 fatty acid oxidation tetrafunctional protein, glyoxysomal -
cucumber gi|551428|emb|CAA55630.1| tetrafunctional
protein [Cucumis sativus]
Length = 725
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = -3
Query: 452 SLGSKYIYSRLDEWSKQYGEFFKPCPYLAARAAKGIPLSASLEQAQSRL 306
SLGS YIYSRL+EWSKQYG FFKPC YLA RA +G LSA A+ R+
Sbjct: 677 SLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATLSAPGGHAKPRM 725
>dbj|BAB63893.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa (japonica cultivar-group)]
gi|21104813|dbj|BAB93398.1| putative tetrafunctional
protein of glyoxysomal fatty acid beta-oxidation [Oryza
sativa (japonica cultivar-group)]
Length = 727
Score = 66.2 bits (160), Expect = 1e-10
Identities = 27/49 (55%), Positives = 39/49 (79%)
Frame = -3
Query: 452 SLGSKYIYSRLDEWSKQYGEFFKPCPYLAARAAKGIPLSASLEQAQSRL 306
S+G+KYI+ +L+ W+K+Y + FKPC YLA RAA G+PLSA +Q ++RL
Sbjct: 679 SIGAKYIHDKLEVWAKRYSDIFKPCSYLAERAANGVPLSAPAKQVKARL 727
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 381,645,786
Number of Sequences: 1393205
Number of extensions: 7666248
Number of successful extensions: 18466
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18465
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11120710906
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
