Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010677A_C01 KMC010677A_c01
(574 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC20184.1| dehydration responsive element binding protein 1... 95 7e-19
gb|AAG43549.1|AF211531_1 Avr9/Cf-9 rapidly elicited protein 111B... 89 5e-17
gb|AAG43548.1|AF211530_1 Avr9/Cf-9 rapidly elicited protein 111A... 86 4e-16
gb|AAK57551.1| putative transcriptional activator CBF1 [Lycopers... 84 1e-15
dbj|BAC20183.1| dehydratiion responsive element binding protein ... 83 3e-15
>dbj|BAC20184.1| dehydration responsive element binding protein 1 like protein
[Prunus avium]
Length = 240
Score = 94.7 bits (234), Expect = 7e-19
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 22/139 (15%)
Frame = -2
Query: 573 AAIALRGRSACLNFADSAWRLPVPATKDARGIRKAAVEAAEAFRP--------------- 439
AA+A RG+ AC+NFADSAWRLPVPA+ D IR+AA EAAE FRP
Sbjct: 104 AALAFRGKLACINFADSAWRLPVPASMDTMDIRRAAAEAAEGFRPVEFGGVCSGSSDEKE 163
Query: 438 --VVETETGEGRKGGESSETVPALTVKVDQEEEA--VPEFLRNMA---LMSPTHCWGSEY 280
VV+ E + +KG + E +L++ EEE +P L +MA L+SP+ C G Y
Sbjct: 164 RMVVQVEE-KNKKGSVNLERSRSLSLSYWDEEEVFHMPRLLHDMAEGLLLSPSQCLGG-Y 221
Query: 279 GAADVEFLDAEVSLWSFSI 223
D DA+V LWSFSI
Sbjct: 222 MNLDDMGTDADVKLWSFSI 240
>gb|AAG43549.1|AF211531_1 Avr9/Cf-9 rapidly elicited protein 111B [Nicotiana tabacum]
Length = 219
Score = 88.6 bits (218), Expect = 5e-17
Identities = 59/123 (47%), Positives = 74/123 (59%), Gaps = 6/123 (4%)
Frame = -2
Query: 573 AAIALRGRSACLNFADSAWRLPVPATKDARGIRKAAVEAAEAFRPVVETETGEGRKGGES 394
AAIALRGRSACLNFADSAW+LP+PA+ DA+ I+KAA EAAEAFR E E G ++
Sbjct: 102 AAIALRGRSACLNFADSAWKLPIPASTDAKDIQKAAAEAAEAFRS-SEAENMPEYSGEDT 160
Query: 393 SETVPALTVKVDQEEEA---VPEFLRNMA---LMSPTHCWGSEYGAADVEFLDAEVSLWS 232
E +EEA +P L NMA ++ P C S+ G D D ++ LWS
Sbjct: 161 KEVNSTPENMFYMDEEALFFMPGLLVNMAEGLMLPPPQC--SQIG--DHMEADVDMPLWS 216
Query: 231 FSI 223
+SI
Sbjct: 217 YSI 219
>gb|AAG43548.1|AF211530_1 Avr9/Cf-9 rapidly elicited protein 111A [Nicotiana tabacum]
Length = 183
Score = 85.5 bits (210), Expect = 4e-16
Identities = 59/123 (47%), Positives = 73/123 (58%), Gaps = 6/123 (4%)
Frame = -2
Query: 573 AAIALRGRSACLNFADSAWRLPVPATKDARGIRKAAVEAAEAFRPVVETETGEGRKGGES 394
AAIALRGRSACLNFADSAW+L +PA+ DA+ I+KAA EAAEAFR E E G +S
Sbjct: 66 AAIALRGRSACLNFADSAWKLHIPASTDAKDIQKAAAEAAEAFR-TSEAENMPEYSGEDS 124
Query: 393 SETVPALTVKVDQEEEA---VPEFLRNMA---LMSPTHCWGSEYGAADVEFLDAEVSLWS 232
E +EEA +P L NMA ++ P C S+ G D D ++ LWS
Sbjct: 125 KEVNSTPENMFYMDEEALFCMPGLLANMAEGLMLPPPQC--SQIG--DHMEDDFDMPLWS 180
Query: 231 FSI 223
+SI
Sbjct: 181 YSI 183
>gb|AAK57551.1| putative transcriptional activator CBF1 [Lycopersicon esculentum]
Length = 210
Score = 84.0 bits (206), Expect = 1e-15
Identities = 55/121 (45%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Frame = -2
Query: 573 AAIALRGRSACLNFADSAWRLPVPATKDARGIRKAAVEAAEAFRPVVETETGEGRKGGES 394
AA+ALRGRSACLNF+DSAWRLP+PA+ +++ I+KAA +A E FR E +GE E+
Sbjct: 97 AALALRGRSACLNFSDSAWRLPIPASSNSKDIQKAAAQAVEIFRS--EEVSGE---SPET 151
Query: 393 SETVPALTVKVDQEE-EAVPEFLRNMA---LMSPTHCWGSEYGAADVEFLDAEVSLWSFS 226
SE V + VD+E +P L NMA ++ P C +E G VE ++LW++S
Sbjct: 152 SENVQESSDFVDEEAIFFMPGLLANMAEGLMLPPPQC--AEMGDHCVETDAYMITLWNYS 209
Query: 225 I 223
I
Sbjct: 210 I 210
>dbj|BAC20183.1| dehydratiion responsive element binding protein 1 like protein
[Prunus avium]
Length = 232
Score = 82.8 bits (203), Expect = 3e-15
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Frame = -2
Query: 573 AAIALRGRSACLNFADSAWRLPVPATKDARGIRKAAVEAAEAFRPVVETETGEGRKGGES 394
A +A RG+ ACLNFADSAWRLPVPA+ DA IR+AA EAAEAFR + E
Sbjct: 106 AVLAFRGKLACLNFADSAWRLPVPASTDAAEIRRAATEAAEAFRQAEDGGVDEKESKAVV 165
Query: 393 SETVPALTVK-------VDQEE-EAVPEFLRNMA---LMSPTHCWGSEYGAADVEFLDAE 247
SE + ++ +D++E +P L +MA ++ P C DVE +D +
Sbjct: 166 SEEKGCVGMEGSSNLFYLDEDEIFEMPRLLDDMADGIMLCPPQCLDGYMDWNDVETVD-D 224
Query: 246 VSLWSFSI 223
+ LWSFSI
Sbjct: 225 LKLWSFSI 232
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 536,127,955
Number of Sequences: 1393205
Number of extensions: 14557401
Number of successful extensions: 217524
Number of sequences better than 10.0: 6543
Number of HSP's better than 10.0 without gapping: 83364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152527
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
