Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010471A_C01 KMC010471A_c01
(475 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD55500.1|AC008148_10 Unknown protein [Arabidopsis thaliana] 95 3e-19
ref|NP_177258.2| unknown protein; protein id: At1g71020.1, suppo... 95 3e-19
pir||E96734 unknown protein F23N20.1 [imported] - Arabidopsis th... 95 3e-19
pir||D86364 hypothetical protein F10G19.3 - Arabidopsis thaliana... 92 4e-18
gb|AAO00878.1| unknown protein [Arabidopsis thaliana] 92 4e-18
>gb|AAD55500.1|AC008148_10 Unknown protein [Arabidopsis thaliana]
Length = 530
Score = 95.1 bits (235), Expect = 3e-19
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = -2
Query: 474 STIPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAK 295
+ IP LID L+ PRN+ENAAAILL LCK+D E L I RLG+V+PL EL+R GTERAK
Sbjct: 451 NAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAK 510
Query: 294 RKATSLLEHLRK 259
RKA SLLE LRK
Sbjct: 511 RKANSLLELLRK 522
Score = 37.7 bits (86), Expect = 0.062
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = -2
Query: 459 LIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRKATS 280
++ +LR G +ENAAA L +L D EN I G+++ L +L + G+ R K+ A +
Sbjct: 332 IVLVLRAGSMEARENAAATLFSLSLAD-ENKIIIGASGAIMALVDLLQYGSVRGKKDAAT 390
Query: 279 LLEHL 265
L +L
Sbjct: 391 ALFNL 395
>ref|NP_177258.2| unknown protein; protein id: At1g71020.1, supported by cDNA:
gi_19715631 [Arabidopsis thaliana]
Length = 480
Score = 95.1 bits (235), Expect = 3e-19
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = -2
Query: 474 STIPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAK 295
+ IP LID L+ PRN+ENAAAILL LCK+D E L I RLG+V+PL EL+R GTERAK
Sbjct: 401 NAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAK 460
Query: 294 RKATSLLEHLRK 259
RKA SLLE LRK
Sbjct: 461 RKANSLLELLRK 472
Score = 37.7 bits (86), Expect = 0.062
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = -2
Query: 459 LIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRKATS 280
++ +LR G +ENAAA L +L D EN I G+++ L +L + G+ R K+ A +
Sbjct: 282 IVLVLRAGSMEARENAAATLFSLSLAD-ENKIIIGASGAIMALVDLLQYGSVRGKKDAAT 340
Query: 279 LLEHL 265
L +L
Sbjct: 341 ALFNL 345
>pir||E96734 unknown protein F23N20.1 [imported] - Arabidopsis thaliana
gi|12323419|gb|AAG51682.1|AC016972_1 unknown protein;
17861-15581 [Arabidopsis thaliana]
gi|19715632|gb|AAL91637.1| At1g71020/F23N20_1
[Arabidopsis thaliana] gi|22655468|gb|AAM98326.1|
At1g71020/F23N20_1 [Arabidopsis thaliana]
Length = 628
Score = 95.1 bits (235), Expect = 3e-19
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = -2
Query: 474 STIPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAK 295
+ IP LID L+ PRN+ENAAAILL LCK+D E L I RLG+V+PL EL+R GTERAK
Sbjct: 549 NAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAK 608
Query: 294 RKATSLLEHLRK 259
RKA SLLE LRK
Sbjct: 609 RKANSLLELLRK 620
Score = 37.7 bits (86), Expect = 0.062
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = -2
Query: 459 LIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRKATS 280
++ +LR G +ENAAA L +L D EN I G+++ L +L + G+ R K+ A +
Sbjct: 430 IVLVLRAGSMEARENAAATLFSLSLAD-ENKIIIGASGAIMALVDLLQYGSVRGKKDAAT 488
Query: 279 LLEHL 265
L +L
Sbjct: 489 ALFNL 493
>pir||D86364 hypothetical protein F10G19.3 - Arabidopsis thaliana
gi|2462822|gb|AAB72157.1| hypothetical protein
[Arabidopsis thaliana]
Length = 618
Score = 91.7 bits (226), Expect = 4e-18
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = -2
Query: 474 STIPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAK 295
+T+P LI +L+T RN+ENAAAILL+LCK+D E L I RLG+V+PL +L++ GTER K
Sbjct: 544 NTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGK 603
Query: 294 RKATSLLEHLRKLQQ 250
RKA SLLE LRK Q
Sbjct: 604 RKAISLLELLRKACQ 618
Score = 40.0 bits (92), Expect = 0.013
Identities = 24/65 (36%), Positives = 35/65 (52%)
Frame = -2
Query: 459 LIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRKATS 280
++ +LR G +ENAAA L +L D EN I G++ L +L GT R K+ A +
Sbjct: 425 IVQVLRAGTMEARENAAATLFSLSLAD-ENKIIIGGSGAIPALVDLLENGTPRGKKDAAT 483
Query: 279 LLEHL 265
L +L
Sbjct: 484 ALFNL 488
Score = 34.7 bits (78), Expect = 0.53
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 468 IPVLIDLLRTGLPRNKENAAAILLALC 388
IP L+DLL G PR K++AA L LC
Sbjct: 463 IPALVDLLENGTPRGKKDAATALFNLC 489
Score = 31.2 bits (69), Expect = 5.8
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = -2
Query: 468 IPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRK 289
IPVL++LL + +ENA +L L + N I G+V + ++ R GT A+
Sbjct: 381 IPVLVNLLTSEDVATQENAITCVLNLSIYE-NNKELIMFAGAVTSIVQVLRAGTMEAREN 439
Query: 288 ATSLL 274
A + L
Sbjct: 440 AAATL 444
>gb|AAO00878.1| unknown protein [Arabidopsis thaliana]
Length = 612
Score = 91.7 bits (226), Expect = 4e-18
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = -2
Query: 474 STIPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAK 295
+T+P LI +L+T RN+ENAAAILL+LCK+D E L I RLG+V+PL +L++ GTER K
Sbjct: 538 NTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGK 597
Query: 294 RKATSLLEHLRKLQQ 250
RKA SLLE LRK Q
Sbjct: 598 RKAISLLELLRKACQ 612
Score = 40.0 bits (92), Expect = 0.013
Identities = 24/65 (36%), Positives = 35/65 (52%)
Frame = -2
Query: 459 LIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRKATS 280
++ +LR G +ENAAA L +L D EN I G++ L +L GT R K+ A +
Sbjct: 419 IVQVLRAGTMEARENAAATLFSLSLAD-ENKIIIGGSGAIPALVDLLENGTPRGKKDAAT 477
Query: 279 LLEHL 265
L +L
Sbjct: 478 ALFNL 482
Score = 34.7 bits (78), Expect = 0.53
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 468 IPVLIDLLRTGLPRNKENAAAILLALC 388
IP L+DLL G PR K++AA L LC
Sbjct: 457 IPALVDLLENGTPRGKKDAATALFNLC 483
Score = 31.2 bits (69), Expect = 5.8
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = -2
Query: 468 IPVLIDLLRTGLPRNKENAAAILLALCKKDAENLACISRLGSVIPLTELTRTGTERAKRK 289
IPVL++LL + +ENA +L L + N I G+V + ++ R GT A+
Sbjct: 375 IPVLVNLLTSEDVATQENAITCVLNLSIYE-NNKELIMFAGAVTSIVQVLRAGTMEAREN 433
Query: 288 ATSLL 274
A + L
Sbjct: 434 AAATL 438
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 375,120,478
Number of Sequences: 1393205
Number of extensions: 7207876
Number of successful extensions: 18736
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 18289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18723
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
