Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010380A_C01 KMC010380A_c01
(402 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T46726 secreted acid phosphatase 2 precursor [imported] - L... 35 0.29
dbj|BAB24621.1| unnamed protein product [Mus musculus] 32 1.5
ref|XP_135468.1| similar to hypothetical protein FLJ14345 [Homo ... 32 1.5
ref|XP_112239.1| similar to hypothetical protein FLJ32191 [Homo ... 32 1.5
gb|AAO82417.1| cell wall surface anchor family protein [Enteroco... 32 1.9
>pir||T46726 secreted acid phosphatase 2 precursor [imported] - Leishmania
mexicana gi|603857|emb|CAA87091.1| secreted acid
phosphatase 2 (SAP2) [Leishmania mexicana]
Length = 888
Score = 34.7 bits (78), Expect = 0.29
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2
Query: 356 SITDLKTTSTDDTSSGSANQDTTMSSSDAYTTFSTV 249
S +D TTS+D T++ S+++ T SSSDA TT S V
Sbjct: 774 SSSDATTTSSDVTTTSSSSEGTATSSSDATTTSSDV 809
Score = 31.6 bits (70), Expect = 2.5
Identities = 18/49 (36%), Positives = 29/49 (58%), Gaps = 2/49 (4%)
Frame = -2
Query: 338 TTSTDDTSSGSANQDTTMSSSDAYTTFS--TVRYDQSI*TSTGKGSVLS 198
TTS+ D ++ S+++ T SSSDA TT S T + T++ +G+ S
Sbjct: 531 TTSSSDATTTSSSEGTATSSSDATTTSSEGTATSSSDVTTTSSEGTATS 579
Score = 29.6 bits (65), Expect = 9.4
Identities = 20/53 (37%), Positives = 33/53 (61%)
Frame = -2
Query: 356 SITDLKTTSTDDTSSGSANQDTTMSSSDAYTTFSTVRYDQSI*TSTGKGSVLS 198
S +D T+S+ D ++ S+++ TT SSSDA TT S+ + TS+ +G+ S
Sbjct: 502 SSSDATTSSSSDATTTSSSEGTTSSSSDA-TTSSS----DATTTSSSEGTATS 549
>dbj|BAB24621.1| unnamed protein product [Mus musculus]
Length = 129
Score = 32.3 bits (72), Expect = 1.5
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 1 NKIESLSNLSLNTSLVHIYRTSHLATSMSWSLTSKTKQNRNTQKVCK 141
+K + LSN+ L S Y+T+H + ++ +S K + RN +KVCK
Sbjct: 84 SKWDKLSNVILEASQCTPYKTNHTSDALQFS-NQKRLKPRNNKKVCK 129
>ref|XP_135468.1| similar to hypothetical protein FLJ14345 [Homo sapiens] [Mus
musculus]
Length = 403
Score = 32.3 bits (72), Expect = 1.5
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 1 NKIESLSNLSLNTSLVHIYRTSHLATSMSWSLTSKTKQNRNTQKVCK 141
+K + LSN+ L S Y+T+H + ++ +S K + RN +KVCK
Sbjct: 8 SKWDKLSNVILEASQCTPYKTNHTSDALQFS-NQKRLKPRNNKKVCK 53
>ref|XP_112239.1| similar to hypothetical protein FLJ32191 [Homo sapiens] [Mus
musculus]
Length = 690
Score = 32.3 bits (72), Expect = 1.5
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 1 NKIESLSNLSLNTSLVHIYRTSHLATSMSWSLTSKTKQNRNTQKVCK 141
+K + LSN+ L + Y+T+H + ++ +S T K + RNT++VCK
Sbjct: 113 SKWDKLSNVILESLQCTPYKTNHSSDALQFS-TQKRLKPRNTKEVCK 158
>gb|AAO82417.1| cell wall surface anchor family protein [Enterococcus faecalis
V583]
Length = 255
Score = 32.0 bits (71), Expect = 1.9
Identities = 21/71 (29%), Positives = 35/71 (48%)
Frame = -2
Query: 356 SITDLKTTSTDDTSSGSANQDTTMSSSDAYTTFSTVRYDQSI*TSTGKGSVLSFEYFCLI 177
SI + + DT++ + TT SSS TT S+ + + I STG+ + F +I
Sbjct: 181 SINQSAESVSSDTTNTESTLQTTTSSSKKATTSSSTEHKKGIFPSTGEKKSVLFTIIGII 240
Query: 176 SLGLYPM*ILQ 144
L L + I++
Sbjct: 241 LLSLVSIFIIK 251
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,946,646
Number of Sequences: 1393205
Number of extensions: 6055573
Number of successful extensions: 17767
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 16651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17685
length of database: 448,689,247
effective HSP length: 109
effective length of database: 296,829,902
effective search space used: 7123917648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
