Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010246A_C01 KMC010246A_c01
(561 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA34017.1| protein kinase 2 151 5e-36
pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2... 142 2e-33
gb|AAC69450.1| putative serine/threonine protein kinase [Nicotia... 140 1e-32
gb|AAD00240.1| PK11-C5 [Nicotiana tabacum] 139 2e-32
gb|AAG60195.1|AC084763_15 protein kinase REK [Oryza sativa] 129 2e-29
>gb|AAA34017.1| protein kinase 2
Length = 339
Score = 151 bits (382), Expect = 5e-36
Identities = 80/128 (62%), Positives = 101/128 (78%), Gaps = 4/128 (3%)
Frame = -3
Query: 559 RKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIAEIKQNPWFLKSLPKEII 380
RK+IGRI+ VQY+IPDYVRVS ECR+L+SRIFVA+PAKRI I+EIKQ+ WF K+LP+EII
Sbjct: 211 RKSIGRIMSVQYAIPDYVRVSKECRHLISRIFVANPAKRINISEIKQHLWFRKNLPREII 270
Query: 379 EAETKGFVETKKDQLSQSVEEIMRIVQEARTPGQGGSKAIDGGQVGTGSMDV----EDDE 212
EAE +G+ ET+KDQ SQSVEEIM+I+QEART K G Q GTG+ DV E +E
Sbjct: 271 EAERRGYEETQKDQPSQSVEEIMQIIQEART------KIHTGEQAGTGTSDVVRGDEANE 324
Query: 211 EIDVSGDY 188
E+D++ +
Sbjct: 325 EVDINDHF 332
>pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2.7.1.-) -
soybean gi|169991|gb|AAA33979.1| protein kinase
Length = 339
Score = 142 bits (359), Expect = 2e-33
Identities = 76/128 (59%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
Frame = -3
Query: 559 RKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIAEIKQNPWFLKSLPKEII 380
RK+IGRI+ VQY+IPDYVRVS ECR+L+S IFVA+PAKRI+I+EIKQ+ WF K+LP+EII
Sbjct: 211 RKSIGRIMSVQYAIPDYVRVSKECRHLISCIFVANPAKRISISEIKQHLWFRKNLPREII 270
Query: 379 EAETKGFVETKKDQLSQSVEEIMRIVQEARTPGQGGSKAIDGGQVGTGSMDV----EDDE 212
E E +G+V+ K+ Q SQSVEE MRI+QEART K G Q GTG+ D E +E
Sbjct: 271 EPERRGYVDHKRTQPSQSVEETMRIIQEART------KIHTGEQAGTGTSDAVHGDEANE 324
Query: 211 EIDVSGDY 188
E+D++ Y
Sbjct: 325 EVDINDHY 332
>gb|AAC69450.1| putative serine/threonine protein kinase [Nicotiana tabacum]
gi|4098172|gb|AAD00239.1| PK11-C1 [Nicotiana tabacum]
Length = 339
Score = 140 bits (352), Expect = 1e-32
Identities = 76/127 (59%), Positives = 95/127 (73%), Gaps = 3/127 (2%)
Frame = -3
Query: 559 RKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIAEIKQNPWFLKSLPKEII 380
RKTIGRI+ QYSIPDYVR+SA+C+NLLSRIFVA+P+KRITI EIK++PWFLK+LPK+++
Sbjct: 211 RKTIGRIMSAQYSIPDYVRISADCKNLLSRIFVANPSKRITIPEIKKHPWFLKNLPKDLM 270
Query: 379 EAETKGFVETKKDQLSQSVEEIMRIVQEARTPGQGGSKAIDGGQVGTGSM-DVEDD--EE 209
+ E + E +QL QSVEEIMRI+QEA+ PG+ SK GT D EDD E
Sbjct: 271 DGEHSKY-EEASEQLQQSVEEIMRIIQEAKIPGE-VSKPEGQATAGTAEPDDTEDDLESE 328
Query: 208 IDVSGDY 188
ID S D+
Sbjct: 329 IDSSNDF 335
>gb|AAD00240.1| PK11-C5 [Nicotiana tabacum]
Length = 339
Score = 139 bits (351), Expect = 2e-32
Identities = 72/126 (57%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Frame = -3
Query: 559 RKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIAEIKQNPWFLKSLPKEII 380
RKTIGRI+ Q+SIPDYVR+SA+C+NLLSRIFVA+P+KRITI EIK++PWFLK+LPK+++
Sbjct: 211 RKTIGRIMSAQFSIPDYVRISADCKNLLSRIFVANPSKRITIPEIKKHPWFLKNLPKDLM 270
Query: 379 EAETKGFVETKKDQLSQSVEEIMRIVQEARTPGQGGSKAIDGGQVGTGSMDVEDD--EEI 206
+ E + E +QL QSVEEIMRI+QEA+ PG+ + T D EDD EI
Sbjct: 271 DGEHSKY-EEASEQLQQSVEEIMRIIQEAKIPGEVSKPEGQATERTTEQDDTEDDLESEI 329
Query: 205 DVSGDY 188
D S D+
Sbjct: 330 DSSNDF 335
>gb|AAG60195.1|AC084763_15 protein kinase REK [Oryza sativa]
Length = 334
Score = 129 bits (325), Expect = 2e-29
Identities = 68/125 (54%), Positives = 91/125 (72%)
Frame = -3
Query: 559 RKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIAEIKQNPWFLKSLPKEII 380
RKTI RI+GVQYSIPDYVRVS++CR LLS+IFVADP+KRITI EIK++ WFLK+LPKEI
Sbjct: 211 RKTISRILGVQYSIPDYVRVSSDCRRLLSQIFVADPSKRITIPEIKKHTWFLKNLPKEIS 270
Query: 379 EAETKGFVETKKDQLSQSVEEIMRIVQEARTPGQGGSKAIDGGQVGTGSMDVEDDEEIDV 200
E E + +T +Q+VEEIMRI+QEA+ PG A D + +++ D+E +
Sbjct: 271 EREKADYKDTDAAPPTQAVEEIMRIIQEAKVPGD--MAAADPALLAE-LAELKSDDEEEA 327
Query: 199 SGDYE 185
+ +Y+
Sbjct: 328 ADEYD 332
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,638,008
Number of Sequences: 1393205
Number of extensions: 10490939
Number of successful extensions: 38562
Number of sequences better than 10.0: 758
Number of HSP's better than 10.0 without gapping: 35327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38246
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
