Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010059A_C01 KMC010059A_c01
(867 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF01764.2|AF184277_1 homeodomain-leucine zipper protein 56 [... 105 2e-36
gb|AAK84885.1|AF402604_1 homeodomain leucine zipper protein HDZ1... 102 6e-21
dbj|BAB18164.1| homeobox-leucine zipper protein [Zinnia elegans] 83 5e-15
dbj|BAB18171.1| homeobox-leucine zipper protein [Zinnia elegans] 83 5e-15
gb|AAM48290.1| homeodomain protein Hfi22 [Nicotiana tabacum] 72 8e-12
>gb|AAF01764.2|AF184277_1 homeodomain-leucine zipper protein 56 [Glycine max]
Length = 275
Score = 105 bits (262), Expect(2) = 2e-36
Identities = 52/80 (65%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Frame = -3
Query: 676 VLQSHDFFISPGSSSLKFNCSSSSSPSSMSCFQFQKQYHPA--QYVKMEEHNFLSADEAC 503
VLQSH +SP SSS+ +CFQFQKQY QYVKMEEHNFLSADEAC
Sbjct: 208 VLQSHGLLLSPSSSSMN------------NCFQFQKQYQTTTTQYVKMEEHNFLSADEAC 255
Query: 502 NFFSDEQPPTLQWYCQEEWN 443
NFFSDEQ PTLQWYC EEW+
Sbjct: 256 NFFSDEQAPTLQWYCSEEWS 275
Score = 70.1 bits (170), Expect(2) = 2e-36
Identities = 44/68 (64%), Positives = 51/68 (74%), Gaps = 4/68 (5%)
Frame = -1
Query: 867 AIPGSDSKELSYDCCFKSSDDGVDGTTTASLFAENLKDGSSDSDSSAILNEDNN--SP-- 700
AIPGSD+KELSY+ CF SD+ G +S+F + KDGSSDSDSSAILNE+NN SP
Sbjct: 144 AIPGSDTKELSYE-CFNKSDEVGGG---SSVFHVDFKDGSSDSDSSAILNEENNNHSPNN 199
Query: 699 NAAISSSG 676
NAAISS G
Sbjct: 200 NAAISSCG 207
>gb|AAK84885.1|AF402604_1 homeodomain leucine zipper protein HDZ1 [Phaseolus vulgaris]
Length = 259
Score = 102 bits (255), Expect = 6e-21
Identities = 49/66 (74%), Positives = 53/66 (80%)
Frame = -3
Query: 640 SSSLKFNCSSSSSPSSMSCFQFQKQYHPAQYVKMEEHNFLSADEACNFFSDEQPPTLQWY 461
SS + S SS S M+CFQFQKQ+ P QYVKMEEHNFLSADEACNFFSDEQ PTLQWY
Sbjct: 195 SSGAMQSQSFLSSSSPMNCFQFQKQF-PTQYVKMEEHNFLSADEACNFFSDEQAPTLQWY 253
Query: 460 CQEEWN 443
C EEW+
Sbjct: 254 CSEEWS 259
Score = 63.5 bits (153), Expect = 4e-09
Identities = 42/77 (54%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = -1
Query: 867 AIPGSDSKELSYDCCFKSSDDGVDGTTTASLFAENLKDGSSDSDSSAILNEDN-----NS 703
AIPGS+SKELSY+C F SD+ + KDGSSDSDSSAILNE+N NS
Sbjct: 140 AIPGSESKELSYEC-FNKSDEVL-----------GFKDGSSDSDSSAILNEENANNNDNS 187
Query: 702 P-NAAISSSGFFRVTTF 655
P NA ISSSG + +F
Sbjct: 188 PNNATISSSGAMQSQSF 204
>dbj|BAB18164.1| homeobox-leucine zipper protein [Zinnia elegans]
Length = 151
Score = 83.2 bits (204), Expect = 5e-15
Identities = 38/66 (57%), Positives = 45/66 (67%)
Frame = -3
Query: 625 FNCSSSSSPSSMSCFQFQKQYHPAQYVKMEEHNFLSADEACNFFSDEQPPTLQWYCQEEW 446
F SS S SS QK Y P Q+VK+EEHNF DE+CNFFSD+Q PTLQWYCQ++W
Sbjct: 87 FKDGSSDSDSSAIMGDAQKAYQP-QFVKLEEHNFFGGDESCNFFSDDQAPTLQWYCQDQW 145
Query: 445 N*HRKN 428
N +N
Sbjct: 146 NLSEEN 151
>dbj|BAB18171.1| homeobox-leucine zipper protein [Zinnia elegans]
Length = 247
Score = 83.2 bits (204), Expect = 5e-15
Identities = 38/66 (57%), Positives = 45/66 (67%)
Frame = -3
Query: 625 FNCSSSSSPSSMSCFQFQKQYHPAQYVKMEEHNFLSADEACNFFSDEQPPTLQWYCQEEW 446
F SS S SS QK Y P Q+VK+EEHNF DE+CNFFSD+Q PTLQWYCQ++W
Sbjct: 183 FKDGSSDSDSSAIMGDAQKAYQP-QFVKLEEHNFFGGDESCNFFSDDQAPTLQWYCQDQW 241
Query: 445 N*HRKN 428
N +N
Sbjct: 242 NLSEEN 247
>gb|AAM48290.1| homeodomain protein Hfi22 [Nicotiana tabacum]
Length = 308
Score = 72.4 bits (176), Expect = 8e-12
Identities = 36/71 (50%), Positives = 45/71 (62%), Gaps = 5/71 (7%)
Frame = -3
Query: 640 SSSLKFNCSSSSSPSSMSCFQFQK----QYHPAQYVKMEEHNFLSADEACN-FFSDEQPP 476
S+SL F + S S + QK Y P QYVKMEEHNF + +E+C+ F+DEQ P
Sbjct: 235 STSLNFCFQFTESSSKSNLGDGQKGNNNYYQPQQYVKMEEHNFFNGEESCSTLFTDEQAP 294
Query: 475 TLQWYCQEEWN 443
TLQWYC E+WN
Sbjct: 295 TLQWYCPEDWN 305
Score = 60.5 bits (145), Expect = 3e-08
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = -1
Query: 789 TTASLFAENLKDGSSDSDSSAILNEDNNSPNAAISSSGFFRVTTFSFLQGHLR*SSTAL 613
T+ ++F +N KDGSSDSDSSAILNEDN+ AAISSSG F ++T G+ SST+L
Sbjct: 182 TSTNIFGDNFKDGSSDSDSSAILNEDNSPNAAAISSSGAFLISTNG--NGNGNGSSTSL 238
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 774,009,029
Number of Sequences: 1393205
Number of extensions: 17889010
Number of successful extensions: 73018
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 59908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71478
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46267227342
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
