Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010041A_C01 KMC010041A_c01
(746 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC55693.1| P0453E05.3 [Oryza sativa (japonica cultivar-group)] 70 3e-11
gb|AAN77310.1| Putative DHHC-type zinc finger protein [Oryza sat... 66 6e-10
gb|AAM00987.1|AC090482_16 Putative DHHC-type zinc finger protein... 63 4e-09
ref|NP_177101.1| DHHC-type zinc finger protein, putative; protei... 52 7e-06
ref|NP_701167.1| hypothetical protein [Plasmodium falciparum 3D7... 34 1.9
>dbj|BAC55693.1| P0453E05.3 [Oryza sativa (japonica cultivar-group)]
Length = 617
Score = 70.1 bits (170), Expect = 3e-11
Identities = 31/51 (60%), Positives = 42/51 (81%)
Frame = -2
Query: 724 AAGAATLKEFPLSRSTSDGYEASGGEDSDQVPTRIVQRSTNWSNLLFSADQ 572
A G+ + LSRSTSDGYEASGGEDSD++P+RIV RS+NW++++ S+DQ
Sbjct: 552 APGSTPQQGIELSRSTSDGYEASGGEDSDRIPSRIVHRSSNWASIILSSDQ 602
>gb|AAN77310.1| Putative DHHC-type zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 586
Score = 65.9 bits (159), Expect = 6e-10
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = -2
Query: 688 SRSTSDGYEASGGEDSDQVPTRIVQRSTNWSNLLFSADQ-DDRTYEPNSSSS 536
SRSTSDGYEASGGEDSD++P+RIV RS+NW+N + S+ Q +PN SS
Sbjct: 533 SRSTSDGYEASGGEDSDRIPSRIVHRSSNWANAILSSGQGGGPAADPNMPSS 584
>gb|AAM00987.1|AC090482_16 Putative DHHC-type zinc finger protein [Oryza sativa]
Length = 589
Score = 63.2 bits (152), Expect = 4e-09
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = -2
Query: 727 AAAGAATLKEFPLSRSTSDGYEASGGEDSDQVPTRIVQRSTNWSNLLFSADQDDRTYEPN 548
AA+ + K LSRSTS GYEASGGE+SD++P++IV RS+NW+N + ++ + + + N
Sbjct: 516 AASESTAPKSIALSRSTSGGYEASGGEESDRIPSKIVHRSSNWANAILNSGRREMAADLN 575
Query: 547 SSSS 536
+S
Sbjct: 576 LPTS 579
>ref|NP_177101.1| DHHC-type zinc finger protein, putative; protein id: At1g69420.1
[Arabidopsis thaliana]
gi|12325083|gb|AAG52492.1|AC018364_10 hypothetical
protein; 3218-172 [Arabidopsis thaliana]
gi|12597779|gb|AAG60091.1|AC073178_2 DHHC-type zinc
finger protein, putative [Arabidopsis thaliana]
Length = 519
Score = 52.4 bits (124), Expect = 7e-06
Identities = 28/58 (48%), Positives = 36/58 (61%), Gaps = 12/58 (20%)
Frame = -2
Query: 745 RLGGLSAAAGAA------------TLKEFPLSRSTSDGYEASGGEDSDQVPTRIVQRS 608
+L G S+A G ++ PLSRSTSDGY+ASGGEDSDQVP+R + +S
Sbjct: 461 QLNGFSSAVGLMGQQRGQQQQQQLSMMMMPLSRSTSDGYDASGGEDSDQVPSRNIHKS 518
>ref|NP_701167.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23496232|gb|AAN35891.1|AE014840_39 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1338
Score = 34.3 bits (77), Expect = 1.9
Identities = 24/86 (27%), Positives = 37/86 (42%)
Frame = -1
Query: 263 NFNQVFMDHICLICKLFATLKNIQVPILWSHLARNHKLLSVFSDLESQP*FSLHH*DASF 84
NF + DHICLI + K I + + + L +++ ++H
Sbjct: 465 NFYNIIKDHICLITDHYFNNKVSNNKIAQADSSFSFLLTDAHDTEKNRDQRYINH----- 519
Query: 83 NNYYNIFMFNNSFNQ*NRTVNNNHFN 6
NNY N +NN N N ++NNH N
Sbjct: 520 NNYNNHNNYNNHNNHNNYNIHNNHSN 545
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 624,732,821
Number of Sequences: 1393205
Number of extensions: 13255853
Number of successful extensions: 34656
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 28817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34132
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36032594816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
