Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010032A_C01 KMC010032A_c01
(800 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181661.1| strictosidine synthase-related; protein id: At2... 71 2e-11
gb|AAC27642.1| putative strictosidine synthase [Arabidopsis thal... 71 2e-11
gb|AAF75751.1|AF261141_1 putative strictosidine synthase [Lycope... 69 6e-11
ref|NP_191262.1| strictosidine synthase-related; protein id: At3... 66 7e-10
ref|NP_680189.1| similar to strictosidine synthase-related; prot... 64 3e-09
>ref|NP_181661.1| strictosidine synthase-related; protein id: At2g41290.1
[Arabidopsis thaliana] gi|25335890|pir||A84840 probable
strictosidine synthase [imported] - Arabidopsis thaliana
gi|3894194|gb|AAC78543.1| putative strictosidine
synthase [Arabidopsis thaliana]
Length = 376
Score = 70.9 bits (172), Expect = 2e-11
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +1
Query: 325 CGGPYEEHPKREHICGRPLGLCFNMQSGELYVADAYMGLVVVEPNGGTA*PLRP*EV 495
C GP+E H + EH+CGRPLGL F+ +G+LY+ADAYMGL+ V P GG A + P E+
Sbjct: 96 CEGPHE-HQRTEHVCGRPLGLAFDKSTGDLYIADAYMGLLKVGPTGGVATQVLPREL 151
>gb|AAC27642.1| putative strictosidine synthase [Arabidopsis thaliana]
Length = 376
Score = 70.9 bits (172), Expect = 2e-11
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +1
Query: 325 CGGPYEEHPKREHICGRPLGLCFNMQSGELYVADAYMGLVVVEPNGGTA*PLRP*EV 495
C GP+E H + EH+CGRPLGL F+ +G+LY+ADAYMGL+ V P GG A + P E+
Sbjct: 96 CEGPHE-HQRTEHVCGRPLGLAFDKSTGDLYIADAYMGLLKVGPTGGVANQVLPREL 151
>gb|AAF75751.1|AF261141_1 putative strictosidine synthase [Lycopersicon esculentum]
Length = 351
Score = 69.3 bits (168), Expect = 6e-11
Identities = 33/52 (63%), Positives = 39/52 (74%)
Frame = +1
Query: 325 CGGPYEEHPKREHICGRPLGLCFNMQSGELYVADAYMGLVVVEPNGGTA*PL 480
C P+ PK EHICGRPLGL F+ ++GELY+ADAY+GL VV P GG A PL
Sbjct: 90 CTSPFA--PKMEHICGRPLGLRFDTKTGELYIADAYLGLQVVGPKGGLATPL 139
>ref|NP_191262.1| strictosidine synthase-related; protein id: At3g57030.1
[Arabidopsis thaliana] gi|11280567|pir||T47763
hypothetical protein F24I3.110 - Arabidopsis thaliana
gi|6911873|emb|CAB72173.1| putative protein [Arabidopsis
thaliana]
Length = 372
Score = 65.9 bits (159), Expect = 7e-10
Identities = 30/53 (56%), Positives = 40/53 (74%)
Frame = +1
Query: 322 KCGGPYEEHPKREHICGRPLGLCFNMQSGELYVADAYMGLVVVEPNGGTA*PL 480
+C P+ P+ EH+CGRPLGL F+ ++G+LY+ADAY GL+VV P GG A PL
Sbjct: 98 ECARPFA--PELEHVCGRPLGLRFDKKTGDLYIADAYFGLLVVGPAGGLAKPL 148
>ref|NP_680189.1| similar to strictosidine synthase-related; protein id: At5g22020.1
[Arabidopsis thaliana] gi|13374861|emb|CAC34495.1|
putative strictosidine synthase-like [Arabidopsis
thaliana]
Length = 395
Score = 63.5 bits (153), Expect = 3e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +1
Query: 352 KREHICGRPLGLCFNMQSGELYVADAYMGLVVVEPNGGTA*PL 480
+ EHICGRPLGL F+ ++G+LY+ADAYMGL+ V P GG A PL
Sbjct: 130 RNEHICGRPLGLRFDKRTGDLYIADAYMGLLKVGPEGGLATPL 172
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 704,105,502
Number of Sequences: 1393205
Number of extensions: 15805427
Number of successful extensions: 32430
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 31283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32415
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40616159090
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
