Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009846A_C01 KMC009846A_c01
(641 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32681.1| putative protein [Arabidopsis thaliana] gi|213871... 87 2e-16
ref|NP_193705.1| putative protein; protein id: At4g19700.1, supp... 86 4e-16
ref|NP_199323.1| putative protein; protein id: At5g45100.1, supp... 80 2e-14
gb|AAM67026.1| unknown [Arabidopsis thaliana] 59 4e-08
ref|NP_566438.1| expressed protein; protein id: At3g12920.1, sup... 59 5e-08
>gb|AAL32681.1| putative protein [Arabidopsis thaliana] gi|21387161|gb|AAM47984.1|
putative protein [Arabidopsis thaliana]
Length = 303
Score = 87.0 bits (214), Expect = 2e-16
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 7/185 (3%)
Frame = +3
Query: 108 MNLLPSHLLPNREIIKSNHQQQQQHYQHQNLLNLDIYNNAQVDSASALPMPGATMAESLL 287
MN+ + PNR+ +K ++ + L + V+ +A
Sbjct: 8 MNIFSQFISPNRDCVKFQENMNHGEFEFTGEVPLITGESFAVEPLAA------------- 54
Query: 288 PFYQSNVCDPNTADSGLTYNL---PLQRKRSREFTSELASFPAQQKNKL---SSESSFFD 449
++N N A+SGL+YN PL KR R+F ++ P ++++ SS S
Sbjct: 55 ---KANF---NKAESGLSYNFTVPPLSTKRQRDFQFSDSNAPVKRRSVAFDSSSPSLINV 108
Query: 450 QVLYQFQNQQ-SEIDRVLAHHTEKVRMEMEEHKMRQSRMLACVIQETVAKKLKEKDEEVQ 626
+++ Q QNQQ SEIDR +A TEK+R+E+E + Q+RMLA +Q +AKKLKEKD+E+
Sbjct: 109 ELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIV 168
Query: 627 KMGKL 641
++ L
Sbjct: 169 RIRNL 173
>ref|NP_193705.1| putative protein; protein id: At4g19700.1, supported by cDNA:
gi_17065053 [Arabidopsis thaliana]
gi|7487076|pir||T04751 hypothetical protein T16H5.60 -
Arabidopsis thaliana gi|3250679|emb|CAA19687.1| putative
protein [Arabidopsis thaliana]
gi|7268766|emb|CAB78972.1| putative protein [Arabidopsis
thaliana]
Length = 304
Score = 85.9 bits (211), Expect = 4e-16
Identities = 50/115 (43%), Positives = 74/115 (63%), Gaps = 7/115 (6%)
Frame = +3
Query: 318 NTADSGLTYNL---PLQRKRSREFTSELASFPAQQKNKL---SSESSFFDQVLYQFQNQQ 479
N A+SGL+YN PL KR R+F ++ P ++++ SS S +++ Q QNQQ
Sbjct: 60 NKAESGLSYNFTVPPLSTKRQRDFQFSDSNAPVKRRSVAFDSSSPSLINVELVSQIQNQQ 119
Query: 480 -SEIDRVLAHHTEKVRMEMEEHKMRQSRMLACVIQETVAKKLKEKDEEVQKMGKL 641
SEIDR +A TEK+R+E+E + Q+RMLA +Q +AKKLKEKD+E+ ++ L
Sbjct: 120 QSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRNL 174
>ref|NP_199323.1| putative protein; protein id: At5g45100.1, supported by cDNA:
gi_16604441 [Arabidopsis thaliana]
gi|9758985|dbj|BAB09495.1|
gene_id:K17O22.9~pir||T04751~strong similarity to
unknown protein [Arabidopsis thaliana]
gi|16604442|gb|AAL24227.1| AT5g45100/K17O22_9
[Arabidopsis thaliana] gi|23505847|gb|AAN28783.1|
At5g45100/K17O22_9 [Arabidopsis thaliana]
Length = 294
Score = 80.5 bits (197), Expect = 2e-14
Identities = 60/181 (33%), Positives = 87/181 (47%), Gaps = 3/181 (1%)
Frame = +3
Query: 108 MNLLPSHLLPNREIIKSNHQQQQQHYQHQNLLNLDIYNNAQVDSASALPMPGATMAESLL 287
MNL S + NRE +KS NN Q + P+ T+ + L
Sbjct: 8 MNLFSSQYITNRECVKSQTNM----------------NNGQQIAGGGFPV---TIGDRNL 48
Query: 288 PFYQSNVCDPNTADSGLTYNLPLQRKRSREFTSELASFPAQQKNKLS--SESSFFD-QVL 458
+ DP + + L KR R+ T + + A QK + S +S D +++
Sbjct: 49 QYI-----DPINSFNKSESELTAISKRQRDSTFDSDALIASQKRRAIAFSPASLIDAELV 103
Query: 459 YQFQNQQSEIDRVLAHHTEKVRMEMEEHKMRQSRMLACVIQETVAKKLKEKDEEVQKMGK 638
Q Q Q SEIDR +A TE +R+E+E + Q+RMLA +Q + KKLK KDEE+ +MGK
Sbjct: 104 SQIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGK 163
Query: 639 L 641
L
Sbjct: 164 L 164
>gb|AAM67026.1| unknown [Arabidopsis thaliana]
Length = 335
Score = 59.3 bits (142), Expect = 4e-08
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 213 IYNNAQVDSASALPM-PGATMAESLLPFYQSNVCDPNTADSGLTYNLPLQ-RKRSREFTS 386
IYN + VD M P +S L F +D+ + + P+ RKRSRE +
Sbjct: 55 IYNISPVDGLVHQSMKPTIQSVDSSLTF---------NSDNNVDFLRPVSSRKRSREESV 105
Query: 387 EL--ASFPAQQKNKLSSESSFFDQVLYQFQNQQSEIDRVLAHHTEKVRMEMEEHKMRQSR 560
L +++ QKN + Q +IDR++++H E++RME+EE + Q R
Sbjct: 106 VLKPSAYMQIQKNPTDPLMFLGQDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGR 165
Query: 561 MLACVIQETVAKKLKEKDEEVQKMGKL 641
+ +++ + K L+ KD+E+ +GKL
Sbjct: 166 RIVEAVEQGLMKTLRAKDDEINHIGKL 192
>ref|NP_566438.1| expressed protein; protein id: At3g12920.1, supported by cDNA: 924.
[Arabidopsis thaliana] gi|15795121|dbj|BAB02499.1|
gene_id:MGH6.3~unknown protein [Arabidopsis thaliana]
gi|26451940|dbj|BAC43062.1| unknown protein [Arabidopsis
thaliana]
Length = 335
Score = 58.9 bits (141), Expect = 5e-08
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 213 IYNNAQVDSASALPM-PGATMAESLLPFYQSNVCDPNTADSGLTYNLPLQ-RKRSREFTS 386
IYN + VD M P +S L F +D+ + + P+ RKRSRE +
Sbjct: 55 IYNISPVDRLVHQSMKPTIQSVDSSLTF---------NSDNNVDFLRPVSSRKRSREESV 105
Query: 387 EL--ASFPAQQKNKLSSESSFFDQVLYQFQNQQSEIDRVLAHHTEKVRMEMEEHKMRQSR 560
L +++ QKN + Q +IDR++++H E++RME+EE + Q R
Sbjct: 106 VLNPSAYMQIQKNPTDPLMFLGQDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGR 165
Query: 561 MLACVIQETVAKKLKEKDEEVQKMGKL 641
+ +++ + K L+ KD+E+ +GKL
Sbjct: 166 RIVEAVEQGLMKTLRAKDDEINHIGKL 192
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 551,259,572
Number of Sequences: 1393205
Number of extensions: 12034409
Number of successful extensions: 49451
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 41492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48270
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
