Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009836A_C01 KMC009836A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL67041.1| unknown protein [Arabidopsis thaliana] gi|2775474... 204 8e-52
ref|NP_564987.1| expressed protein; protein id: At1g70330.1, sup... 204 8e-52
gb|AAF26446.1|AF220759_1 putative nucleoside transporter [Arabid... 202 2e-51
pir||C86156 T14P4.9 protein - Arabidopsis thaliana gi|9972375|gb... 160 7e-39
ref|NP_171763.1| hypothetical protein; protein id: At1g02630.1 [... 160 7e-39
>gb|AAL67041.1| unknown protein [Arabidopsis thaliana] gi|27754746|gb|AAO22816.1|
unknown protein [Arabidopsis thaliana]
Length = 450
Score = 204 bits (518), Expect = 8e-52
Identities = 98/121 (80%), Positives = 108/121 (88%)
Frame = -2
Query: 547 DWYPILLITGYNVFDLVGKSLTAVYLLENAKIAIGSCIVRLLFFPLFFGCLHGPEFFRTE 368
DWYPILLI YNVFDLVGK LTAV++LE+ KIA+G I RLLF+PLF+GCLHGP F RTE
Sbjct: 330 DWYPILLIAAYNVFDLVGKCLTAVFMLEDEKIAVGGSIARLLFYPLFWGCLHGPMFLRTE 389
Query: 367 IPVTILTCLLGLTNGYLTSVLMILAPKTVKLQQSETVGIVCVLFLVIGLASGSVIAWFWV 188
IPVTILTCLLGLTNGYLTSVLMILAPK+V L+ SET GIV V+FLV+GLASGSVIAWFWV
Sbjct: 390 IPVTILTCLLGLTNGYLTSVLMILAPKSVPLRHSETAGIVTVMFLVVGLASGSVIAWFWV 449
Query: 187 I 185
I
Sbjct: 450 I 450
>ref|NP_564987.1| expressed protein; protein id: At1g70330.1, supported by cDNA:
gi_6715513 [Arabidopsis thaliana] gi|7485677|pir||T01489
hypothetical protein F17O7.13 - Arabidopsis thaliana
gi|3176684|gb|AAC18807.1| Contains similarity to
equilibratiave nucleoside transporter 1 gb|U81375 from
Homo sapiens. ESTs gb|N65317, gb|T20785, gb|AA586285
and gb|AA712578 come from this gene. [Arabidopsis
thaliana]
Length = 428
Score = 204 bits (518), Expect = 8e-52
Identities = 98/121 (80%), Positives = 108/121 (88%)
Frame = -2
Query: 547 DWYPILLITGYNVFDLVGKSLTAVYLLENAKIAIGSCIVRLLFFPLFFGCLHGPEFFRTE 368
DWYPILLI YNVFDLVGK LTAV++LE+ KIA+G I RLLF+PLF+GCLHGP F RTE
Sbjct: 308 DWYPILLIAAYNVFDLVGKCLTAVFMLEDEKIAVGGSIARLLFYPLFWGCLHGPMFLRTE 367
Query: 367 IPVTILTCLLGLTNGYLTSVLMILAPKTVKLQQSETVGIVCVLFLVIGLASGSVIAWFWV 188
IPVTILTCLLGLTNGYLTSVLMILAPK+V L+ SET GIV V+FLV+GLASGSVIAWFWV
Sbjct: 368 IPVTILTCLLGLTNGYLTSVLMILAPKSVPLRHSETAGIVTVMFLVVGLASGSVIAWFWV 427
Query: 187 I 185
I
Sbjct: 428 I 428
>gb|AAF26446.1|AF220759_1 putative nucleoside transporter [Arabidopsis thaliana]
Length = 428
Score = 202 bits (515), Expect = 2e-51
Identities = 98/121 (80%), Positives = 107/121 (87%)
Frame = -2
Query: 547 DWYPILLITGYNVFDLVGKSLTAVYLLENAKIAIGSCIVRLLFFPLFFGCLHGPEFFRTE 368
DWYPILLI YNVFDLVGK LTAV++LE+ KIA+G I RLLF+PLF+GCLHGP F RTE
Sbjct: 308 DWYPILLIAAYNVFDLVGKCLTAVFMLEDEKIAVGGSIARLLFYPLFWGCLHGPMFLRTE 367
Query: 367 IPVTILTCLLGLTNGYLTSVLMILAPKTVKLQQSETVGIVCVLFLVIGLASGSVIAWFWV 188
IPVTILTCLLGLTNGYLTSVLMILAPK+V L+ SET GIV V FLV+GLASGSVIAWFWV
Sbjct: 368 IPVTILTCLLGLTNGYLTSVLMILAPKSVPLRHSETAGIVTVTFLVVGLASGSVIAWFWV 427
Query: 187 I 185
I
Sbjct: 428 I 428
>pir||C86156 T14P4.9 protein - Arabidopsis thaliana
gi|9972375|gb|AAG10625.1|AC022521_3 Hypothetical protein
[Arabidopsis thaliana]
Length = 408
Score = 160 bits (406), Expect = 7e-39
Identities = 76/122 (62%), Positives = 94/122 (76%)
Frame = -2
Query: 550 KDWYPILLITGYNVFDLVGKSLTAVYLLENAKIAIGSCIVRLLFFPLFFGCLHGPEFFRT 371
+ WYPILLIT YN+ D VGKSLTA+YL ++ K A +CIVRLLF+PLF CL GP++ RT
Sbjct: 287 QSWYPILLITVYNISDFVGKSLTALYLWQSIKSATWACIVRLLFYPLFSACLRGPKWLRT 346
Query: 370 EIPVTILTCLLGLTNGYLTSVLMILAPKTVKLQQSETVGIVCVLFLVIGLASGSVIAWFW 191
E+PV +LT +LGLTNGYLTSVLMI+APKTV ++E I V+FL +GL GSVI W W
Sbjct: 347 EVPVVVLTFMLGLTNGYLTSVLMIMAPKTVHASEAELAAIFMVVFLGLGLVCGSVIGWLW 406
Query: 190 VI 185
+I
Sbjct: 407 LI 408
>ref|NP_171763.1| hypothetical protein; protein id: At1g02630.1 [Arabidopsis
thaliana] gi|28207664|gb|AAO31974.1| putative
equilibrative nucleoside transporter ENT8 [Arabidopsis
thaliana]
Length = 389
Score = 160 bits (406), Expect = 7e-39
Identities = 76/122 (62%), Positives = 94/122 (76%)
Frame = -2
Query: 550 KDWYPILLITGYNVFDLVGKSLTAVYLLENAKIAIGSCIVRLLFFPLFFGCLHGPEFFRT 371
+ WYPILLIT YN+ D VGKSLTA+YL ++ K A +CIVRLLF+PLF CL GP++ RT
Sbjct: 268 QSWYPILLITVYNISDFVGKSLTALYLWQSIKSATWACIVRLLFYPLFSACLRGPKWLRT 327
Query: 370 EIPVTILTCLLGLTNGYLTSVLMILAPKTVKLQQSETVGIVCVLFLVIGLASGSVIAWFW 191
E+PV +LT +LGLTNGYLTSVLMI+APKTV ++E I V+FL +GL GSVI W W
Sbjct: 328 EVPVVVLTFMLGLTNGYLTSVLMIMAPKTVHASEAELAAIFMVVFLGLGLVCGSVIGWLW 387
Query: 190 VI 185
+I
Sbjct: 388 LI 389
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,308,393
Number of Sequences: 1393205
Number of extensions: 10458983
Number of successful extensions: 25076
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 24348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25012
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
