Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009517A_C01 KMC009517A_c01
(559 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG34795.1|AF243360_1 glutathione S-transferase GST 5 [Glycin... 117 1e-25
gb|AAM12496.1|AC074232_23 putative glutathione S-transferase [Or... 105 4e-22
gb|AAK98543.1|AF402802_1 putative glutathione S-transferase OsGS... 105 4e-22
ref|NP_172507.1| glutathione transferase, putative; protein id: ... 100 2e-20
gb|AAG30140.1|AF288191_1 glutathione S-transferase [Arabidopsis ... 97 1e-19
>gb|AAG34795.1|AF243360_1 glutathione S-transferase GST 5 [Glycine max]
Length = 234
Score = 117 bits (293), Expect = 1e-25
Identities = 52/93 (55%), Positives = 70/93 (74%)
Frame = -2
Query: 537 LENMEDAFVKCSKGKAFFGGDKIGYLDIAFGSFLGWLSAIEQEYQRKVLVESKAPALVKW 358
LE +E+ F K S+GKA+FGGD IG++DI FGSFL W+ IE+ RK+L E K P L +W
Sbjct: 135 LERLEEVFNKYSEGKAYFGGDSIGFIDIGFGSFLSWMRVIEEMSGRKLLDEKKHPGLTQW 194
Query: 357 AERFVADPAVKGIIPETDRVVKLSRAFRIKWRA 259
AE F ADPAVKGI+PETD++V+ ++ ++KW A
Sbjct: 195 AETFAADPAVKGILPETDKLVEFAKILQLKWTA 227
>gb|AAM12496.1|AC074232_23 putative glutathione S-transferase [Oryza sativa (japonica
cultivar-group)]
Length = 255
Score = 105 bits (262), Expect = 4e-22
Identities = 47/88 (53%), Positives = 67/88 (75%)
Frame = -2
Query: 549 LDTVLENMEDAFVKCSKGKAFFGGDKIGYLDIAFGSFLGWLSAIEQEYQRKVLVESKAPA 370
+ T L+++E+AFVKCS+GK +FGGDKIGYLDIA GSFLGW+ A+E+ ++L E+K P
Sbjct: 154 MSTALKHLEEAFVKCSQGKKYFGGDKIGYLDIALGSFLGWIKAVEKFAGVELLDEAKVPN 213
Query: 369 LVKWAERFVADPAVKGIIPETDRVVKLS 286
L WA+RF A PAV +P+ D++V+ +
Sbjct: 214 LAAWADRFCAHPAVVDAMPDADKLVEFA 241
>gb|AAK98543.1|AF402802_1 putative glutathione S-transferase OsGSTU15 [Oryza sativa subsp.
japonica] gi|20146764|gb|AAM12500.1|AC074232_27 putative
glutathione S-transferase [Oryza sativa (japonica
cultivar-group)]
Length = 244
Score = 105 bits (262), Expect = 4e-22
Identities = 46/88 (52%), Positives = 66/88 (74%)
Frame = -2
Query: 549 LDTVLENMEDAFVKCSKGKAFFGGDKIGYLDIAFGSFLGWLSAIEQEYQRKVLVESKAPA 370
+ T L+ +E+AFVKCS+GK +FGGD IGYLDIA GSFLGW+ A+E+ ++L E+K P
Sbjct: 142 MSTTLQRLEEAFVKCSQGKEYFGGDSIGYLDIALGSFLGWIKAVEKIAGVELLNETKLPI 201
Query: 369 LVKWAERFVADPAVKGIIPETDRVVKLS 286
L WA+RF A PAV ++P+ D++V+ +
Sbjct: 202 LAVWADRFCAHPAVVDVVPDADKLVEFT 229
>ref|NP_172507.1| glutathione transferase, putative; protein id: At1g10360.1,
supported by cDNA: gi_11096013 [Arabidopsis thaliana]
gi|11096014|gb|AAG30139.1|AF288190_1 glutathione
S-transferase [Arabidopsis thaliana]
gi|24030351|gb|AAN41340.1| putative glutathione
S-transferase TSI-1 [Arabidopsis thaliana]
Length = 227
Score = 100 bits (248), Expect = 2e-20
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = -2
Query: 528 MEDAFVKCSKGKAFFGGDKIGYLDIAFGSFLGWLSAIEQEYQRKVLVESKAPALVKWAER 349
+E AF CS+GK FF GD IGYLDIA GSFLGW +E + K L E+K P+LVKWAER
Sbjct: 138 LEKAFNDCSQGKPFFNGDHIGYLDIALGSFLGWWRVVELDANHKFLDETKTPSLVKWAER 197
Query: 348 FVADPAVKGIIPETDRVVKLSR 283
F DPAVK I+PE ++ + +R
Sbjct: 198 FCDDPAVKPIMPEITKLAEFAR 219
>gb|AAG30140.1|AF288191_1 glutathione S-transferase [Arabidopsis thaliana]
Length = 227
Score = 97.1 bits (240), Expect = 1e-19
Identities = 44/82 (53%), Positives = 56/82 (67%)
Frame = -2
Query: 528 MEDAFVKCSKGKAFFGGDKIGYLDIAFGSFLGWLSAIEQEYQRKVLVESKAPALVKWAER 349
+E AF+ CSKGK FF GD IGYLDIA G FL WL E K+L E+K P+L KWAE
Sbjct: 138 LEKAFIDCSKGKPFFNGDNIGYLDIALGCFLAWLRVTELAVSYKILDEAKTPSLSKWAEN 197
Query: 348 FVADPAVKGIIPETDRVVKLSR 283
F DPAVK ++PET ++ + ++
Sbjct: 198 FCNDPAVKPVMPETAKLAEFAK 219
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,365,208
Number of Sequences: 1393205
Number of extensions: 10559020
Number of successful extensions: 34461
Number of sequences better than 10.0: 219
Number of HSP's better than 10.0 without gapping: 33137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34406
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
