Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC009156A_C01 KMC009156A_c01
(535 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191522.1| putative protein; protein id: At3g59630.1, supp... 60 2e-18
gb|AAC47842.1| CG2 [Plasmodium falciparum] 34 0.96
pir||T09080 probable chloroquine resistance protein CG2 (strain ... 34 0.96
pir||T09079 probable chloroquine resistance protein CG2 (strain ... 34 0.96
ref|NP_473239.1| hypothetical protein [Plasmodium falciparum 3D7... 33 1.6
>ref|NP_191522.1| putative protein; protein id: At3g59630.1, supported by cDNA:
gi_19715608 [Arabidopsis thaliana]
gi|11358053|pir||T49304 hypothetical protein T16L24.180
- Arabidopsis thaliana gi|6996299|emb|CAB75460.1|
putative protein [Arabidopsis thaliana]
gi|19715609|gb|AAL91627.1| AT3g59630/T16L24_180
[Arabidopsis thaliana]
Length = 491
Score = 59.7 bits (143), Expect(2) = 2e-18
Identities = 27/42 (64%), Positives = 32/42 (75%)
Frame = -3
Query: 320 ARSGAEFFRNRSYHGLNMPSENTSPEPYFKGRSGRASGYEDE 195
A+SG E+F NR Y GL + SENT PEPY GRSG+ASGY+ E
Sbjct: 450 AKSGPEYFLNRVYRGLEINSENTLPEPYIVGRSGKASGYKHE 491
Score = 53.5 bits (127), Expect(2) = 2e-18
Identities = 36/77 (46%), Positives = 48/77 (61%), Gaps = 7/77 (9%)
Frame = -2
Query: 534 VMGFRDLINLLQLKVENQ--DEEARFSFLQGRYVEDFENQE---NGEQQS-EALALANAT 373
+M F+D+IN ++ + E EE RFSF QG YVED + + NGE+ + E + L A
Sbjct: 371 LMHFQDVINSVKSESEAHIGSEEPRFSFFQGGYVEDHKTNDQAKNGEEDTGETMTLVQAA 430
Query: 372 EKALQLREN-CNSLIKR 325
EKALQLR N NSL K+
Sbjct: 431 EKALQLRGNDHNSLTKQ 447
>gb|AAC47842.1| CG2 [Plasmodium falciparum]
Length = 2742
Score = 34.3 bits (77), Expect = 0.96
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 YFKGRSGRASGYEDEKNKHD---NL*LMATRCNHILYFIVSLLFEFIAKERKKHFVFIII 69
YFK R AS + +EKNK+ L N ++ + F K++KK+ +F I
Sbjct: 552 YFKKRKKNASIFINEKNKNKIILKFILNNLNGNIQVFMLPFSYFSNKKKKKKKNIIFKNI 611
Query: 68 IIINATHKSFINIIVCFFKKKK 3
+ S+ ++CFF KKK
Sbjct: 612 L-------SYYEYVICFFMKKK 626
>pir||T09080 probable chloroquine resistance protein CG2 (strain HB3) - malaria
parasite (Plasmodium falciparum)
gi|2642516|gb|AAC47854.1| CG2 [Plasmodium falciparum]
Length = 2819
Score = 34.3 bits (77), Expect = 0.96
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 YFKGRSGRASGYEDEKNKHD---NL*LMATRCNHILYFIVSLLFEFIAKERKKHFVFIII 69
YFK R AS + +EKNK+ L N ++ + F K++KK+ +F I
Sbjct: 546 YFKKRKKNASIFINEKNKNKIILKFILNNLNGNIQVFMLPFSYFSNKKKKKKKNIIFKNI 605
Query: 68 IIINATHKSFINIIVCFFKKKK 3
+ S+ ++CFF KKK
Sbjct: 606 L-------SYYEYVICFFMKKK 620
>pir||T09079 probable chloroquine resistance protein CG2 (strain 7G8) - malaria
parasite (Plasmodium falciparum)
gi|2642514|gb|AAC47853.1| CG2 [Plasmodium falciparum]
Length = 2708
Score = 34.3 bits (77), Expect = 0.96
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 YFKGRSGRASGYEDEKNKHD---NL*LMATRCNHILYFIVSLLFEFIAKERKKHFVFIII 69
YFK R AS + +EKNK+ L N ++ + F K++KK+ +F I
Sbjct: 540 YFKKRKKNASIFINEKNKNKIILKFILNNLNGNIQVFMLPFSYFSNKKKKKKKNIIFKNI 599
Query: 68 IIINATHKSFINIIVCFFKKKK 3
+ S+ ++CFF KKK
Sbjct: 600 L-------SYYEYVICFFMKKK 614
>ref|NP_473239.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|7494227|pir||T18459 hypothetical protein C0515c -
malaria parasite (Plasmodium falciparum)
gi|3764008|emb|CAA15601.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 1236
Score = 33.5 bits (75), Expect = 1.6
Identities = 37/146 (25%), Positives = 60/146 (40%), Gaps = 5/146 (3%)
Frame = -3
Query: 494 KLKTKMKKHDFHSYRADMLKILKIKKMVSNKVKLLL*LTRQRRHCSCGRTVIL*SKGDAR 315
KLK K+KK + Y D + L +K+ + N + ++ +C + V
Sbjct: 1043 KLKEKIKKENEKLYELDNISFLYLKRNIMNCLSIVNIQNDLLIINACIKLVY-------- 1094
Query: 314 SGAEFFRNRSYHGLNMPSENTSPEPYFKGRSGRASGYE-----DEKNKHDNL*LMATRCN 150
+ N + + NT+ E YFK + S DEK K+ N + N
Sbjct: 1095 -NLSIYTNFIFKNIIYDQTNTN-EYYFKQLISQISSILLDITLDEKEKNVNKSIYVLINN 1152
Query: 149 HILYFIVSLLFEFIAKERKKHFVFII 72
I++FI SL F I K+ ++II
Sbjct: 1153 IIMFFIQSLKFICIHNIHKEESIYII 1178
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 430,382,605
Number of Sequences: 1393205
Number of extensions: 8892798
Number of successful extensions: 24902
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24876
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
