Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008933A_C01 KMC008933A_c01
(514 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171669.1| SEC14 cytosolic factor, putative; protein id: A... 120 7e-27
gb|AAL37896.1|AF443118_1 polyphosphoinositide binding protein [G... 120 7e-27
gb|AAL86320.1| putative polyphosphoinositide binding protein [Ar... 120 7e-27
pir||T05953 polyphosphoinositide binding protein Ssh2 - soybean ... 120 7e-27
gb|AAO20076.1| putative phosphatidylinositol/phosphatidylcholine... 91 8e-18
>ref|NP_171669.1| SEC14 cytosolic factor, putative; protein id: At1g01630.1,
supported by cDNA: 20163. [Arabidopsis thaliana]
gi|25295906|pir||B86147 hypothetical protein T1N6.1
[imported] - Arabidopsis thaliana
gi|8671832|gb|AAF78395.1|AC009273_1 Strong similarity to
polyphosphoinositide binding protein Ssh2 from soybean
gb|AF024652. It contains a CRAL/TRIO domain PF|00650.
EST gb|AI995792 comes from this gene. [Arabidopsis
thaliana] gi|21554088|gb|AAM63169.1|
polyphosphoinositide binding protein, putative
[Arabidopsis thaliana] gi|23297520|gb|AAN12987.1|
putative polyphosphoinositide-binding protein
[Arabidopsis thaliana]
Length = 255
Score = 120 bits (302), Expect = 7e-27
Identities = 55/70 (78%), Positives = 65/70 (92%)
Frame = -1
Query: 514 RLGKLFIVHAPYIFMKVWKLVYPFIDDNTKKKIVFVDNQKLKSTLLEEIDESQLPEIYGG 335
RLGKL+IVHAPYIFM WK++YPFID NTKKKIVFV+N+KL TLLE+IDESQLP+IYGG
Sbjct: 186 RLGKLYIVHAPYIFMTAWKVIYPFIDANTKKKIVFVENKKLTPTLLEDIDESQLPDIYGG 245
Query: 334 QLPLVPIQDS 305
+LPLVPIQ++
Sbjct: 246 KLPLVPIQET 255
>gb|AAL37896.1|AF443118_1 polyphosphoinositide binding protein [Gossypium hirsutum]
Length = 247
Score = 120 bits (302), Expect = 7e-27
Identities = 55/70 (78%), Positives = 64/70 (90%)
Frame = -1
Query: 514 RLGKLFIVHAPYIFMKVWKLVYPFIDDNTKKKIVFVDNQKLKSTLLEEIDESQLPEIYGG 335
RLGK+FIVHAPY+FM WK+V+PFID T+KKIVFV+N+ LKSTLLEEIDESQLPE+YGG
Sbjct: 178 RLGKMFIVHAPYVFMAAWKIVHPFIDVKTRKKIVFVENKSLKSTLLEEIDESQLPEMYGG 237
Query: 334 QLPLVPIQDS 305
LPL+PIQDS
Sbjct: 238 TLPLIPIQDS 247
>gb|AAL86320.1| putative polyphosphoinositide binding protein [Arabidopsis
thaliana]
Length = 192
Score = 120 bits (302), Expect = 7e-27
Identities = 55/70 (78%), Positives = 65/70 (92%)
Frame = -1
Query: 514 RLGKLFIVHAPYIFMKVWKLVYPFIDDNTKKKIVFVDNQKLKSTLLEEIDESQLPEIYGG 335
RLGKL+IVHAPYIFM WK++YPFID NTKKKIVFV+N+KL TLLE+IDESQLP+IYGG
Sbjct: 123 RLGKLYIVHAPYIFMTAWKVIYPFIDANTKKKIVFVENKKLTPTLLEDIDESQLPDIYGG 182
Query: 334 QLPLVPIQDS 305
+LPLVPIQ++
Sbjct: 183 KLPLVPIQET 192
>pir||T05953 polyphosphoinositide binding protein Ssh2 - soybean
gi|2739046|gb|AAB94599.1| polyphosphoinositide binding
protein Ssh2p [Glycine max]
Length = 256
Score = 120 bits (302), Expect = 7e-27
Identities = 56/70 (80%), Positives = 66/70 (94%)
Frame = -1
Query: 514 RLGKLFIVHAPYIFMKVWKLVYPFIDDNTKKKIVFVDNQKLKSTLLEEIDESQLPEIYGG 335
RLGKLFIV+APYIFMKVW++VYPFID+ TKKKIVFV+ K+KSTLLEE++ESQ+PEI+GG
Sbjct: 187 RLGKLFIVNAPYIFMKVWQIVYPFIDNKTKKKIVFVEKNKVKSTLLEEMEESQVPEIFGG 246
Query: 334 QLPLVPIQDS 305
LPLVPIQDS
Sbjct: 247 SLPLVPIQDS 256
>gb|AAO20076.1| putative phosphatidylinositol/phosphatidylcholine transfer protein
[Oryza sativa (japonica cultivar-group)]
Length = 261
Score = 90.9 bits (224), Expect = 8e-18
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = -1
Query: 514 RLGKLFIVHAPYIFMKVWKLVYPFIDDNTKKKIVFVDNQKLKSTLLEEIDESQLPEIYGG 335
RLG++F++H PY+FM WK++YPFIDDNTKKK VFV ++ L +TL + ID+S L E YGG
Sbjct: 183 RLGRVFLIHVPYVFMAAWKIIYPFIDDNTKKKFVFVADKDLHATLRDAIDDSNLAEDYGG 242
Query: 334 QLPLV 320
+L LV
Sbjct: 243 KLKLV 247
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,363,475
Number of Sequences: 1393205
Number of extensions: 8827123
Number of successful extensions: 26262
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 24487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25921
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
