Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008915A_C01 KMC008915A_c01
(768 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196274.1| putative protein; protein id: At5g06560.1, supp... 133 3e-30
ref|NP_187791.1| hypothetical protein; protein id: At3g11850.1, ... 124 1e-27
ref|NP_191034.1| putative protein; protein id: At3g54740.1 [Arab... 109 4e-23
gb|AAO24913.1| unknown protein [Oryza sativa (japonica cultivar-... 89 7e-17
dbj|BAC15960.1| OJ1714_H10.42 [Oryza sativa (japonica cultivar-g... 37 0.41
>ref|NP_196274.1| putative protein; protein id: At5g06560.1, supported by cDNA:
gi_13430751, supported by cDNA: gi_15293220 [Arabidopsis
thaliana] gi|10178112|dbj|BAB11405.1|
gb|AAF23201.1~gene_id:F15M7.9~strong similarity to
unknown protein [Arabidopsis thaliana]
gi|13430752|gb|AAK25998.1|AF360288_1 unknown protein
[Arabidopsis thaliana] gi|15293221|gb|AAK93721.1|
unknown protein [Arabidopsis thaliana]
Length = 518
Score = 133 bits (334), Expect = 3e-30
Identities = 65/112 (58%), Positives = 89/112 (79%)
Frame = -1
Query: 768 LQALEADRESMRQALISMRTDKAQLVLLKEIAQPLC*DMSLERKVTARKPYTGGRSSFLS 589
LQALEADRESMRQA++SMRT+KAQ+VLLKEIAQ L D+ ER++ RK G +F+S
Sbjct: 407 LQALEADRESMRQAIMSMRTEKAQMVLLKEIAQHLSKDVVPERRLPLRKTSIIGAFNFIS 466
Query: 588 IFKWVASFVFWRKKAQPSQYMFGLPADSVGLLLLLDQGTRTRPWRCISNTQL 433
+FKW+ SFVFWR+KA+ S+YM G+ +++GL +LL++ R R WRC+S+TQ+
Sbjct: 467 VFKWITSFVFWRRKARRSKYMNGVQGNNMGLQMLLEKTPRIRQWRCLSSTQV 518
>ref|NP_187791.1| hypothetical protein; protein id: At3g11850.1, supported by cDNA:
gi_20466597 [Arabidopsis thaliana]
gi|6671941|gb|AAF23201.1|AC016795_14 hypothetical
protein [Arabidopsis thaliana]
gi|20466598|gb|AAM20616.1| unknown protein [Arabidopsis
thaliana] gi|22136430|gb|AAM91293.1| unknown protein
[Arabidopsis thaliana]
Length = 504
Score = 124 bits (311), Expect = 1e-27
Identities = 58/112 (51%), Positives = 86/112 (76%)
Frame = -1
Query: 768 LQALEADRESMRQALISMRTDKAQLVLLKEIAQPLC*DMSLERKVTARKPYTGGRSSFLS 589
LQALEADRESM+ AL+SMRT+KAQ+VLLKEIAQ L ++ +R++ RK G +F
Sbjct: 393 LQALEADRESMKHALLSMRTEKAQMVLLKEIAQHLSKEVVPQRRLPLRKASIAGPLTFTP 452
Query: 588 IFKWVASFVFWRKKAQPSQYMFGLPADSVGLLLLLDQGTRTRPWRCISNTQL 433
+FKW+ SFV W++KA+ S+YM+G+ +++GL +LL++ R+R WRC+ +TQ+
Sbjct: 453 VFKWITSFVSWKRKARRSKYMYGMSGNNIGLQMLLEKVPRSRKWRCLRSTQV 504
>ref|NP_191034.1| putative protein; protein id: At3g54740.1 [Arabidopsis thaliana]
gi|11358374|pir||T47633 hypothetical protein T5N23.100 -
Arabidopsis thaliana gi|7258378|emb|CAB77594.1| putative
protein [Arabidopsis thaliana]
Length = 438
Score = 109 bits (273), Expect = 4e-23
Identities = 54/113 (47%), Positives = 85/113 (74%), Gaps = 1/113 (0%)
Frame = -1
Query: 768 LQALEADRESMRQALISMRTDKAQLVLLKEIAQPLC*DM-SLERKVTARKPYTGGRSSFL 592
LQALEADRES+RQ ++SMRTDKAQLVLLKEIAQ L + + R+ K + S +
Sbjct: 326 LQALEADRESLRQIIVSMRTDKAQLVLLKEIAQHLTKETGATSRRNPVSKMPSLKVFSVV 385
Query: 591 SIFKWVASFVFWRKKAQPSQYMFGLPADSVGLLLLLDQGTRTRPWRCISNTQL 433
++FKW+ SFV W++KA+ ++Y++ L A+++G+L++L +G+ TR WRC++++ +
Sbjct: 386 TVFKWIVSFVSWKRKARQNKYVYELSANNMGMLMILGEGSGTRRWRCLTSSHV 438
>gb|AAO24913.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|29367601|gb|AAO72662.1| heavy meromyosin-like protein
[Oryza sativa (japonica cultivar-group)]
Length = 356
Score = 89.0 bits (219), Expect = 7e-17
Identities = 45/106 (42%), Positives = 70/106 (65%), Gaps = 1/106 (0%)
Frame = -1
Query: 768 LQALEADRESMRQALISMRTDKAQLVLLKEIAQPLC*DMSLERKVTARKPYTGGRS-SFL 592
++ALEADR +MR+ + ++R ++AQLV+ + +A+ LC ++ E+K A+K RS S L
Sbjct: 246 VEALEADRAAMRREIAALRAERAQLVMARAMARRLCREVVAEQK--AKKVAASPRSFSVL 303
Query: 591 SIFKWVASFVFWRKKAQPSQYMFGLPADSVGLLLLLDQGTRTRPWR 454
+ KWV S +FWR ++ ++Y FGL +G LLLLD+ T PWR
Sbjct: 304 GVCKWVLSIIFWRNRSSTARYTFGLSTTFLGFLLLLDRSTMLSPWR 349
>dbj|BAC15960.1| OJ1714_H10.42 [Oryza sativa (japonica cultivar-group)]
Length = 285
Score = 36.6 bits (83), Expect = 0.41
Identities = 15/36 (41%), Positives = 27/36 (74%)
Frame = -1
Query: 768 LQALEADRESMRQALISMRTDKAQLVLLKEIAQPLC 661
++ALE D +MR+ + ++R ++AQ VL +E+A+ LC
Sbjct: 205 VEALEVDWSAMRREVAALRAERAQAVLAREVARRLC 240
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 680,759,858
Number of Sequences: 1393205
Number of extensions: 15785121
Number of successful extensions: 38151
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 36610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38141
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37534933228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
