Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008763A_C01 KMC008763A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194171.1| serine/threonine kinase-like protein; protein i... 160 9e-39
ref|NP_198391.1| serine/threonine protein kinase SOS2 (gb|AAF629... 103 1e-21
gb|AAL85889.1|AF479060_1 putative serine threonine kinase [Sande... 88 7e-17
pir||T14735 probable serine/threonine kinase (EC 2.7.1.-) SNFL1 ... 78 8e-14
pir||T14736 probable serine/threonine kinase (EC 2.7.1.-) SNFL2 ... 78 8e-14
>ref|NP_194171.1| serine/threonine kinase-like protein; protein id: At4g24400.1,
supported by cDNA: gi_13249114 [Arabidopsis thaliana]
gi|7446447|pir||T09903 serine/threonine-specific protein
kinase homolog T22A6.230 - Arabidopsis thaliana
gi|5051782|emb|CAB45075.1| serine/threonine kinase-like
protein [Arabidopsis thaliana]
gi|7269290|emb|CAB79350.1| serine/threonine kinase-like
protein [Arabidopsis thaliana]
gi|19343483|gb|AAK16683.2|AF290193_1 CBL-interacting
protein kinase 8 [Arabidopsis thaliana]
gi|24030396|gb|AAN41358.1| putative serine/threonine
kinase [Arabidopsis thaliana]
Length = 445
Score = 160 bits (406), Expect = 9e-39
Identities = 78/103 (75%), Positives = 89/103 (85%)
Frame = -2
Query: 601 PAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGLSAKKTSHFSVMLEIFEVAPTFYMVDIQK 422
PA VVLSSMEVV+QSMGFKTHIRNYKMRVEGLSA KTSHFSV+LE+F+VAP+ MVDIQ
Sbjct: 343 PANVVLSSMEVVSQSMGFKTHIRNYKMRVEGLSANKTSHFSVILEVFKVAPSILMVDIQN 402
Query: 421 AAGDAGEYLKFYKNFCGHLEDIIWKPPHESTKSKVS*TRSKRR 293
AAGDA EYLKFYK FC L+DIIWKPP S +++V+ +SKRR
Sbjct: 403 AAGDAEEYLKFYKTFCSKLDDIIWKPPDASMRNRVTKAKSKRR 445
>ref|NP_198391.1| serine/threonine protein kinase SOS2 (gb|AAF62923.1); protein id:
At5g35410.1, supported by cDNA: gi_14701909, supported
by cDNA: gi_20466309 [Arabidopsis thaliana]
gi|7453645|gb|AAF62923.1|AF237670_1 serine/threonine
protein kinase SOS2 [Arabidopsis thaliana]
gi|8978255|dbj|BAA98146.1| serine/threonine protein
kinase SOS2 [Arabidopsis thaliana]
gi|14701910|gb|AAK72257.1|AF395081_1 CBL-interacting
protein kinase 24 [Arabidopsis thaliana]
gi|20466310|gb|AAM20472.1| serine/threonine protein
kinase SOS2 [Arabidopsis thaliana]
gi|25083992|gb|AAN72149.1| serine/threonine protein
kinase SOS2 [Arabidopsis thaliana]
Length = 446
Score = 103 bits (258), Expect = 1e-21
Identities = 46/91 (50%), Positives = 68/91 (74%)
Frame = -2
Query: 589 VLSSMEVVAQSMGFKTHIRNYKMRVEGLSAKKTSHFSVMLEIFEVAPTFYMVDIQKAAGD 410
+++++E VA SMGFK+H RN+K R+EGLS+ K +V++EI+EVAP+ +MVD++KAAG+
Sbjct: 350 IIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGE 409
Query: 409 AGEYLKFYKNFCGHLEDIIWKPPHESTKSKV 317
EY KFYK C LE+IIW+ KS++
Sbjct: 410 TLEYHKFYKKLCSKLENIIWRATEGIPKSEI 440
>gb|AAL85889.1|AF479060_1 putative serine threonine kinase [Sandersonia aurantiaca]
Length = 235
Score = 88.2 bits (217), Expect = 7e-17
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Frame = -2
Query: 601 PAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGLSAKKTSHFSVMLEIFEVAPTFYMVDIQK 422
P +LS +E A+ +GF NYKM ++G + H SV E+FEVAP+ +MV+++K
Sbjct: 139 PPNEILSKIEETAKPLGFNVRKHNYKMNLQGDKTGRKGHLSVATEVFEVAPSLHMVELRK 198
Query: 421 AAGDAGEYLKFYKNFCGHLEDIIWK----PPHESTKS 323
GD E+ KFYKNF L+DI+WK P E T+S
Sbjct: 199 TGGDTLEFHKFYKNFSSGLKDIVWKAEALPEQEETRS 235
>pir||T14735 probable serine/threonine kinase (EC 2.7.1.-) SNFL1 - sorghum
gi|2632252|emb|CAA73067.1| serine/threonine kinase
[Sorghum bicolor]
Length = 440
Score = 78.2 bits (191), Expect = 8e-14
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = -2
Query: 601 PAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGLSAKKTSHFSVMLEIFEVAPTFYMVDIQK 422
P K ++ +E A+ +GF +NYK+R+E + A + + +V EI +VAP+ +MV+++K
Sbjct: 346 PPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRK 405
Query: 421 AAGDAGEYLKFYKNFCGHLEDIIWK 347
A GD E+ KFYKN L+D++WK
Sbjct: 406 AKGDTLEFHKFYKNLSKTLKDVVWK 430
>pir||T14736 probable serine/threonine kinase (EC 2.7.1.-) SNFL2 - sorghum
gi|2632254|emb|CAA73068.1| serine/threonine kinase
[Sorghum bicolor]
Length = 440
Score = 78.2 bits (191), Expect = 8e-14
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = -2
Query: 601 PAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGLSAKKTSHFSVMLEIFEVAPTFYMVDIQK 422
P K ++ +E A+ +GF +NYK+R+E + A + + +V EI +VAP+ +MV+++K
Sbjct: 346 PPKEIVRKIEEAAKPLGFGVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRK 405
Query: 421 AAGDAGEYLKFYKNFCGHLEDIIWK 347
A GD E+ KFYKN L+D++WK
Sbjct: 406 AKGDTLEFQKFYKNLSKTLKDVVWK 430
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 523,262,250
Number of Sequences: 1393205
Number of extensions: 11267829
Number of successful extensions: 24301
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 23439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24257
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
