Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008528A_C01 KMC008528A_c01
(605 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191249.1| putative protein; protein id: At3g56900.1 [Arab... 179 2e-44
dbj|BAC43280.1| unknown protein [Arabidopsis thaliana] gi|289510... 179 2e-44
ref|NP_700465.1| RIKEN cDNA D030041N15; aladin; adracalin [Mus m... 60 2e-08
sp|P58742|AAAS_MOUSE Aladin (Adracalin) gi|17390426|gb|AAH18191.... 60 2e-08
dbj|BAC39811.1| unnamed protein product [Mus musculus] 60 2e-08
>ref|NP_191249.1| putative protein; protein id: At3g56900.1 [Arabidopsis thaliana]
gi|11358434|pir||T51278 hypothetical protein T8M16_230 -
Arabidopsis thaliana gi|9663009|emb|CAC00753.1| putative
protein [Arabidopsis thaliana]
Length = 440
Score = 179 bits (454), Expect = 2e-44
Identities = 79/98 (80%), Positives = 91/98 (92%)
Frame = -2
Query: 604 LTGSQGIEKIAWDNSGERLAVSFKGGDEMYRGLIAVYDTRRTPLISTSLIGFIRGPGDNP 425
LTG +GIEKIAWD SGERLAVS+KGGDE Y+GLIA+YDTRRTP++S SL+GFIRGPG+NP
Sbjct: 342 LTGCEGIEKIAWDASGERLAVSYKGGDENYKGLIAIYDTRRTPIVSASLVGFIRGPGENP 401
Query: 424 KPISFSFHGKLKQGPLLSVCWSSGFCCTYPLLFRSHML 311
K +SFSFH K KQGPLLSVCWS+GFCCTYPL+FRSH+L
Sbjct: 402 KALSFSFHDKFKQGPLLSVCWSTGFCCTYPLIFRSHVL 439
>dbj|BAC43280.1| unknown protein [Arabidopsis thaliana] gi|28951013|gb|AAO63430.1|
At3g56900 [Arabidopsis thaliana]
Length = 447
Score = 179 bits (454), Expect = 2e-44
Identities = 79/98 (80%), Positives = 91/98 (92%)
Frame = -2
Query: 604 LTGSQGIEKIAWDNSGERLAVSFKGGDEMYRGLIAVYDTRRTPLISTSLIGFIRGPGDNP 425
LTG +GIEKIAWD SGERLAVS+KGGDE Y+GLIA+YDTRRTP++S SL+GFIRGPG+NP
Sbjct: 349 LTGCEGIEKIAWDASGERLAVSYKGGDENYKGLIAIYDTRRTPIVSASLVGFIRGPGENP 408
Query: 424 KPISFSFHGKLKQGPLLSVCWSSGFCCTYPLLFRSHML 311
K +SFSFH K KQGPLLSVCWS+GFCCTYPL+FRSH+L
Sbjct: 409 KALSFSFHDKFKQGPLLSVCWSTGFCCTYPLIFRSHVL 446
>ref|NP_700465.1| RIKEN cDNA D030041N15; aladin; adracalin [Mus musculus]
gi|19343738|gb|AAH25501.1| Unknown (protein for
MGC:38135) [Mus musculus] gi|26353208|dbj|BAC40234.1|
unnamed protein product [Mus musculus]
Length = 546
Score = 60.5 bits (145), Expect = 2e-08
Identities = 36/87 (41%), Positives = 49/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 577 IAWDNSGERLAVSFKGGDEMYRG--LIAVYDTRRTPLISTSLIGFIRG-PGDNPKPISFS 407
+ WD SGERLAV KG ++ G +I ++ TR +P+ G I+G PG + I+F
Sbjct: 402 MVWDPSGERLAVLMKGNPQVQDGNPVILLFRTRNSPVFELLPCGIIQGEPGAQAQLITF- 460
Query: 406 FHGKLKQGPLLSVCWSSGFCCTYPLLF 326
H +G LLSVCWS+G PL F
Sbjct: 461 -HPSFNKGALLSVCWSTGRITHIPLYF 486
>sp|P58742|AAAS_MOUSE Aladin (Adracalin) gi|17390426|gb|AAH18191.1| Similar to aladin
[Mus musculus] gi|26330051|dbj|BAC28764.1| unnamed
protein product [Mus musculus]
gi|26350617|dbj|BAC38945.1| unnamed protein product [Mus
musculus]
Length = 546
Score = 60.5 bits (145), Expect = 2e-08
Identities = 36/87 (41%), Positives = 49/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 577 IAWDNSGERLAVSFKGGDEMYRG--LIAVYDTRRTPLISTSLIGFIRG-PGDNPKPISFS 407
+ WD SGERLAV KG ++ G +I ++ TR +P+ G I+G PG + I+F
Sbjct: 402 MVWDPSGERLAVLMKGNPQVQDGNPVILLFRTRNSPVFELLPCGIIQGEPGAQAQLITF- 460
Query: 406 FHGKLKQGPLLSVCWSSGFCCTYPLLF 326
H +G LLSVCWS+G PL F
Sbjct: 461 -HPSFNKGALLSVCWSTGRITHIPLYF 486
>dbj|BAC39811.1| unnamed protein product [Mus musculus]
Length = 229
Score = 60.5 bits (145), Expect = 2e-08
Identities = 36/87 (41%), Positives = 49/87 (55%), Gaps = 3/87 (3%)
Frame = -2
Query: 577 IAWDNSGERLAVSFKGGDEMYRG--LIAVYDTRRTPLISTSLIGFIRG-PGDNPKPISFS 407
+ WD SGERLAV KG ++ G +I ++ TR +P+ G I+G PG + I+F
Sbjct: 85 MVWDPSGERLAVLMKGNPQVQDGNPVILLFRTRNSPVFELLPCGIIQGEPGAQAQLITF- 143
Query: 406 FHGKLKQGPLLSVCWSSGFCCTYPLLF 326
H +G LLSVCWS+G PL F
Sbjct: 144 -HPSFNKGALLSVCWSTGRITHIPLYF 169
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,345,868
Number of Sequences: 1393205
Number of extensions: 11449826
Number of successful extensions: 28148
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28127
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
