Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008186A_C01 KMC008186A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178230.1| leucine-rich repeat transmembrane protein kinas... 179 2e-44
dbj|BAB92230.1| putative receptor-like protein kinase [Oryza sat... 163 2e-39
ref|NP_564228.1| leucine-rich repeat transmembrane protein kinas... 161 5e-39
ref|NP_176855.1| leucine-rich repeat transmembrane protein kinas... 117 1e-25
ref|NP_176918.1| leucine-rich repeat transmembrane protein kinas... 99 3e-20
>ref|NP_178230.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At2g01210.1 [Arabidopsis thaliana]
gi|25410890|pir||H84421 probable receptor-like protein
kinase [imported] - Arabidopsis thaliana
gi|4262228|gb|AAD14521.1| putative receptor-like protein
kinase [Arabidopsis thaliana]
Length = 716
Score = 179 bits (455), Expect = 2e-44
Identities = 88/133 (66%), Positives = 106/133 (79%)
Frame = -2
Query: 582 HERPNSLSTEVATNMLGNGYQAPEALKMVKPSQKWDVYSYGVILLEMITGRLPVVQVGIS 403
H + S A + G+ YQAPE LKMVKPSQKWDVYSYG+ILLE+I GR P V+VG S
Sbjct: 585 HHHKSVSSEFTAHSSSGSYYQAPETLKMVKPSQKWDVYSYGIILLELIAGRSPAVEVGTS 644
Query: 402 EMDLVQWIQFCIEDKKPLSDVLDPYLAEEEADKEEEVIAVLKIAMACVNSSPEKRPSMRH 223
EMDLV+W+Q CIE+KKPL DVLDP LA EA+ E+E++AVLKIA++CVNSSPEKRP+MRH
Sbjct: 645 EMDLVRWVQVCIEEKKPLCDVLDPCLA-PEAETEDEIVAVLKIAISCVNSSPEKRPTMRH 703
Query: 222 VLDALDRLSISSD 184
V D LDRL ++ D
Sbjct: 704 VSDTLDRLPVAGD 716
>dbj|BAB92230.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 705
Score = 163 bits (412), Expect = 2e-39
Identities = 80/131 (61%), Positives = 105/131 (80%), Gaps = 3/131 (2%)
Frame = -2
Query: 579 ERPNSLSTEVATNML---GNGYQAPEALKMVKPSQKWDVYSYGVILLEMITGRLPVVQVG 409
E+ S ++ + + L G+ YQAPEALK +KPSQKWDVYSYGVILLEMITGR PVV +
Sbjct: 573 EKAQSQQSDASVSPLVGKGSCYQAPEALKTLKPSQKWDVYSYGVILLEMITGRSPVVLLE 632
Query: 408 ISEMDLVQWIQFCIEDKKPLSDVLDPYLAEEEADKEEEVIAVLKIAMACVNSSPEKRPSM 229
+MDLVQW+QFCIE+KKP +DVLDP LA ++++E+E+IA LK+A+ACV ++PE+RPSM
Sbjct: 633 TMQMDLVQWVQFCIEEKKPSADVLDPSLA-RDSEREDEMIAALKVALACVQANPERRPSM 691
Query: 228 RHVLDALDRLS 196
RHV + LD L+
Sbjct: 692 RHVAETLDHLN 702
>ref|NP_564228.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g25320.1, supported by cDNA: gi_15912326
[Arabidopsis thaliana] gi|25511663|pir||A86383 76.4K
protein kinase homolog F4F7.29 - Arabidopsis thaliana
gi|11067286|gb|AAG28814.1|AC079374_17 unknown protein
[Arabidopsis thaliana] gi|15912327|gb|AAL08297.1|
At1g25320/F4F7_17 [Arabidopsis thaliana]
Length = 702
Score = 161 bits (408), Expect = 5e-39
Identities = 81/132 (61%), Positives = 106/132 (79%), Gaps = 3/132 (2%)
Frame = -2
Query: 579 ERP-NSLSTEVATNM-LGNGYQAPEALKM-VKPSQKWDVYSYGVILLEMITGRLPVVQVG 409
+RP N ++ + ++ L + Y APEA K VKPSQKWDVYS+GVILLEMITGRLP+V VG
Sbjct: 570 DRPSNKTASSIGSSANLSSFYLAPEATKATVKPSQKWDVYSFGVILLEMITGRLPIVFVG 629
Query: 408 ISEMDLVQWIQFCIEDKKPLSDVLDPYLAEEEADKEEEVIAVLKIAMACVNSSPEKRPSM 229
SEM++V+WIQ CI++KK +SD+LDPYL + + EEEVIAVLKIAMACV++SPEKRP M
Sbjct: 630 KSEMEIVKWIQMCIDEKKEMSDILDPYLVPNDTEIEEEVIAVLKIAMACVSTSPEKRPPM 689
Query: 228 RHVLDALDRLSI 193
+H+ DAL ++ +
Sbjct: 690 KHIADALTQICL 701
>ref|NP_176855.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g66830.1 [Arabidopsis thaliana]
gi|12597769|gb|AAG60082.1|AC013288_16 receptor protein
kinase, putative [Arabidopsis thaliana]
Length = 685
Score = 117 bits (293), Expect = 1e-25
Identities = 60/113 (53%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Frame = -2
Query: 525 YQAPEAL-KMVKPSQKWDVYSYGVILLEMITGRLPVVQVGISEMDLVQWIQFCIEDKKPL 349
YQAPEA KM KPSQKWDVYS+G+++LEM+TG+ PV SEMDLV W++ E KP
Sbjct: 577 YQAPEAASKMTKPSQKWDVYSFGLVILEMVTGKSPV----SSEMDLVMWVESASERNKPA 632
Query: 348 SDVLDPYLAEEEADKEEEVIAVLKIAMACVNSSPEKRPSMRHVLDALDRLSIS 190
VLDP LA + D E+ ++ V+KI +ACV +P+KRP MR VL++ ++L S
Sbjct: 633 WYVLDPVLARDR-DLEDSMVQVIKIGLACVQKNPDKRPHMRSVLESFEKLVTS 684
>ref|NP_176918.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g67510.1 [Arabidopsis thaliana]
gi|7446381|pir||T02154 protein kinase homolog T1F15.2 -
Arabidopsis thaliana gi|3176660|gb|AAC18784.1|AAC18784
Similar to ERECTA receptor protein kinase gb|U47029 from
A. thaliana. [Arabidopsis thaliana]
gi|12324677|gb|AAG52300.1|AC011020_7 putative receptor
protein kinase [Arabidopsis thaliana]
Length = 719
Score = 99.4 bits (246), Expect = 3e-20
Identities = 50/130 (38%), Positives = 83/130 (63%), Gaps = 10/130 (7%)
Frame = -2
Query: 558 TEVATNMLGNGYQAPEA-LKMVKPSQKWDVYSYGVILLEMITGRLP---------VVQVG 409
T + + NGY+APEA L +P+QKWDVYS+GV+L+E++TG+ P V
Sbjct: 591 TSIKPSDRSNGYKAPEARLPGGRPTQKWDVYSFGVVLMELLTGKSPDSSPLSSSSTSTVV 650
Query: 408 ISEMDLVQWIQFCIEDKKPLSDVLDPYLAEEEADKEEEVIAVLKIAMACVNSSPEKRPSM 229
+ DLV+W++ E++ PLSD++DP L +E +++V++V +A+AC PE RP M
Sbjct: 651 VEVPDLVKWVRKGFEEETPLSDMVDPMLL-QEVHAKQQVLSVFHLALACTEGDPEVRPRM 709
Query: 228 RHVLDALDRL 199
++V + +D++
Sbjct: 710 KNVSENIDKI 719
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,340,784
Number of Sequences: 1393205
Number of extensions: 9628216
Number of successful extensions: 37258
Number of sequences better than 10.0: 2782
Number of HSP's better than 10.0 without gapping: 30794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33685
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
