Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007864A_C01 KMC007864A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P58520|API6_SOLTU Aspartic protease inhibitor 6 (API-6) 36 0.37
sp|P58518|API3_SOLTU Aspartic protease inhibitor 3 (API-3) 36 0.37
gb|AAG12337.1| cathepsin D inhibitor [Solanum nigrum] 36 0.37
pir||S10721 cathepsin D inhibitor nid - potato 33 1.8
sp|P58521|API9_SOLTU Aspartic protease inhibitor 9 (Novel inhibi... 33 1.8
>sp|P58520|API6_SOLTU Aspartic protease inhibitor 6 (API-6)
Length = 169
Score = 35.8 bits (81), Expect = 0.37
Identities = 24/72 (33%), Positives = 34/72 (46%)
Frame = -2
Query: 556 NASLRFEQRVSGKSLMERGESLFDTMLDSQTEVYLLSCFFFSFSCLFCPSQPQLLWVVSI 377
NA R +G ++ + S F + S+ LLSC F S CL CP + Q V +
Sbjct: 87 NAYFRTMLLETGGTIGQADNSYFKIVKSSKIGYNLLSCPFTSIICLRCP-EDQFCAKVGV 145
Query: 376 ITLRGKRRMMSV 341
+ GKRR+ V
Sbjct: 146 VIQNGKRRLALV 157
>sp|P58518|API3_SOLTU Aspartic protease inhibitor 3 (API-3)
Length = 169
Score = 35.8 bits (81), Expect = 0.37
Identities = 24/72 (33%), Positives = 34/72 (46%)
Frame = -2
Query: 556 NASLRFEQRVSGKSLMERGESLFDTMLDSQTEVYLLSCFFFSFSCLFCPSQPQLLWVVSI 377
NA R +G ++ + S F + S+ LLSC F S CL CP + Q V +
Sbjct: 87 NAYFRTMLLETGGTIGQADNSYFKIVKSSKIGYNLLSCPFTSIICLRCP-EDQFCAKVGV 145
Query: 376 ITLRGKRRMMSV 341
+ GKRR+ V
Sbjct: 146 VIQNGKRRLALV 157
>gb|AAG12337.1| cathepsin D inhibitor [Solanum nigrum]
Length = 181
Score = 35.8 bits (81), Expect = 0.37
Identities = 24/72 (33%), Positives = 34/72 (46%)
Frame = -2
Query: 556 NASLRFEQRVSGKSLMERGESLFDTMLDSQTEVYLLSCFFFSFSCLFCPSQPQLLWVVSI 377
NA R +G ++ + S F + S+ LLSC F S CL CP + Q V +
Sbjct: 99 NAYFRTMLLETGGTIGQADNSYFKIVKSSKIGYNLLSCPFTSIICLRCP-EDQFCAKVGV 157
Query: 376 ITLRGKRRMMSV 341
+ GKRR+ V
Sbjct: 158 VIQNGKRRLALV 169
>pir||S10721 cathepsin D inhibitor nid - potato
Length = 187
Score = 33.5 bits (75), Expect = 1.8
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -2
Query: 556 NASLRFEQRVSGKSLMERGESLFDTMLDSQTEVYLLSCFFFSFSCLFCPSQPQLLWVVSI 377
NA R +G ++ + S F + S LLSC F S CL CP + Q V +
Sbjct: 105 NAYFRTMLLETGGTIGQADNSYFKIVKLSNFGYNLLSCPFTSIICLRCP-EDQFCAKVGV 163
Query: 376 ITLRGKRRMMSV 341
+ GKRR+ V
Sbjct: 164 VIQNGKRRLALV 175
>sp|P58521|API9_SOLTU Aspartic protease inhibitor 9 (Novel inhibitor of cathepsin D)
(NID)
Length = 187
Score = 33.5 bits (75), Expect = 1.8
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -2
Query: 556 NASLRFEQRVSGKSLMERGESLFDTMLDSQTEVYLLSCFFFSFSCLFCPSQPQLLWVVSI 377
NA R +G ++ + S F + S LLSC F S CL CP + Q V +
Sbjct: 105 NAYFRTMLLETGGTIGQADNSYFKIVKLSNFGYNLLSCPFTSIICLRCP-EDQFCAKVGV 163
Query: 376 ITLRGKRRMMSV 341
+ GKRR+ V
Sbjct: 164 VIQNGKRRLALV 175
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,109,534
Number of Sequences: 1393205
Number of extensions: 10576990
Number of successful extensions: 32764
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32723
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
