Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007659A_C01 KMC007659A_c01
(578 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO42123.1| putative aldo/keto reductase [Arabidopsis thaliana] 67 2e-10
ref|NP_190956.1| aldo/keto reductase family; protein id: At3g538... 61 1e-08
gb|AAO64797.1| At2g37790 [Arabidopsis thaliana] 60 2e-08
pir||T09670 abscisic acid activated protein - alfalfa gi|3378650... 58 1e-07
ref|NP_565871.1| aldo/keto reductase family; protein id: At2g377... 55 5e-07
>gb|AAO42123.1| putative aldo/keto reductase [Arabidopsis thaliana]
Length = 304
Score = 66.6 bits (161), Expect = 2e-10
Identities = 27/48 (56%), Positives = 38/48 (78%)
Frame = -3
Query: 573 SLFDWCIPPELFSKLSQIHQQRLLRGDFAIHESGSPYQSLEELWDGEI 430
++FDW IP +F+K ++I Q RL+ G F +HE+ SPY+S+EELWDGEI
Sbjct: 257 NVFDWSIPDYMFAKFAEIEQARLVTGSFLVHETLSPYKSIEELWDGEI 304
>ref|NP_190956.1| aldo/keto reductase family; protein id: At3g53880.1, supported by
cDNA: 119862. [Arabidopsis thaliana]
gi|11250956|pir||T45928 reductase-like protein -
Arabidopsis thaliana gi|7630008|emb|CAB88350.1|
reductase-like protein [Arabidopsis thaliana]
gi|21537087|gb|AAM61428.1| reductase-like protein
[Arabidopsis thaliana]
Length = 315
Score = 60.8 bits (146), Expect = 1e-08
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = -3
Query: 561 WCIPPELFSKLSQIHQQRLLRGDFAIHESGSPYQSLEELWDGEI 430
W IP E+F K S+I Q RL++G +HE+ SPY++LEELWDGEI
Sbjct: 272 WSIPKEMFDKFSKIEQARLVQGTSFVHETLSPYKTLEELWDGEI 315
>gb|AAO64797.1| At2g37790 [Arabidopsis thaliana]
Length = 314
Score = 60.1 bits (144), Expect = 2e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -3
Query: 570 LFDWCIPPELFSKLSQIHQQRLLRGDFAIHESGSPYQSLEELWDGEI 430
+F+W IP ++ SK S+I Q RL+RG +HE+ SPY+SLEELWDGEI
Sbjct: 269 VFNWSIPEDMLSKFSEIGQGRLVRGMSFVHET-SPYKSLEELWDGEI 314
>pir||T09670 abscisic acid activated protein - alfalfa
gi|3378650|emb|CAA66205.1| abscisic acid activated
[Medicago sativa]
Length = 313
Score = 57.8 bits (138), Expect = 1e-07
Identities = 21/49 (42%), Positives = 37/49 (74%)
Frame = -3
Query: 576 LSLFDWCIPPELFSKLSQIHQQRLLRGDFAIHESGSPYQSLEELWDGEI 430
L ++DW IP +LF K S+I Q +L++G F ++++ ++++EELWDGE+
Sbjct: 265 LDVYDWSIPEDLFPKFSEIKQDKLIKGTFFVNDTYGAFRTIEELWDGEV 313
>ref|NP_565871.1| aldo/keto reductase family; protein id: At2g37760.1, supported by
cDNA: gi_16604706 [Arabidopsis thaliana]
gi|16604707|gb|AAL24146.1| putative alcohol
dehydrogenase [Arabidopsis thaliana]
gi|20197254|gb|AAC23646.2| putative alcohol
dehydrogenase [Arabidopsis thaliana]
gi|21436091|gb|AAM51246.1| putative alcohol
dehydrogenase [Arabidopsis thaliana]
Length = 311
Score = 55.5 bits (132), Expect = 5e-07
Identities = 24/49 (48%), Positives = 33/49 (66%)
Frame = -3
Query: 576 LSLFDWCIPPELFSKLSQIHQQRLLRGDFAIHESGSPYQSLEELWDGEI 430
L +FDW IP +LF+K S I Q++ R HE+ Y+++EELWDGEI
Sbjct: 263 LDVFDWSIPEDLFTKFSNIPQEKFCRATEFAHETHGFYKTIEELWDGEI 311
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 471,511,588
Number of Sequences: 1393205
Number of extensions: 9273939
Number of successful extensions: 21528
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 21082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21518
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
