Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007577A_C01 KMC007577A_c01
(1038 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG33975.1|AF250961_1 methionine aminopeptidase-like protein ... 283 4e-75
ref|NP_172785.1| methionine aminopeptidase I (MAP1), putative; p... 281 9e-75
dbj|BAA95761.1| methionine aminopeptidase-like protein [Arabidop... 252 6e-66
ref|NP_189202.1| methionine aminopeptidase, putative; protein id... 249 6e-65
gb|AAG33976.1|AF250962_1 methionine aminopeptidase-like protein ... 248 1e-64
>gb|AAG33975.1|AF250961_1 methionine aminopeptidase-like protein [Arabidopsis thaliana]
Length = 369
Score = 283 bits (723), Expect = 4e-75
Identities = 132/164 (80%), Positives = 148/164 (89%)
Frame = -1
Query: 1038 QLQNGDIINIDVTVYLNGYHGDTSKTFFCGEVSDAMTNLVKVTEECLEKGIAVCQDGAPF 859
QLQ+GDIINIDVTVYL+GYHGDTS+TFFCGEV + LVKVTEECLEKGIAVC+DGA F
Sbjct: 206 QLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKQLVKVTEECLEKGIAVCKDGASF 265
Query: 858 KKIGKRISEHAEKYGYGVEERFVGHGVGTVFHSEPLIFHHRHDRHGFMVEGQTFTIEPIL 679
KKIGKRISEHAEK+GY V ERFVGHGVG VFHSEPLI+H+R+D G MVEGQTFTIEPIL
Sbjct: 266 KKIGKRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTIEPIL 325
Query: 678 TLGSTESITWPDHWTTLSADGSPAAQFEHTLLITRTGAEILTIC 547
T+G+TE +TWPD+WTTL+ADG AAQFEHT+LITRTG+EILT C
Sbjct: 326 TIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
>ref|NP_172785.1| methionine aminopeptidase I (MAP1), putative; protein id:
At1g13270.1, supported by cDNA: gi_11320955 [Arabidopsis
thaliana] gi|25402759|pir||C86267 probable methionine
aminopeptidase [imported] - Arabidopsis thaliana
gi|9958075|gb|AAG09564.1|AC011810_23 Putative methionine
aminopeptidase [Arabidopsis thaliana]
gi|23306398|gb|AAN17426.1| methionine aminopeptidase I
(MAP1), putative [Arabidopsis thaliana]
gi|24899771|gb|AAN65100.1| methionine aminopeptidase I
(MAP1), putative [Arabidopsis thaliana]
Length = 369
Score = 281 bits (720), Expect = 9e-75
Identities = 131/164 (79%), Positives = 148/164 (89%)
Frame = -1
Query: 1038 QLQNGDIINIDVTVYLNGYHGDTSKTFFCGEVSDAMTNLVKVTEECLEKGIAVCQDGAPF 859
QLQ+GDIINIDVTVYL+GYHGDTS+TFFCGEV + LVKVTEECLE+GIAVC+DGA F
Sbjct: 206 QLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASF 265
Query: 858 KKIGKRISEHAEKYGYGVEERFVGHGVGTVFHSEPLIFHHRHDRHGFMVEGQTFTIEPIL 679
KKIGKRISEHAEK+GY V ERFVGHGVG VFHSEPLI+H+R+D G MVEGQTFTIEPIL
Sbjct: 266 KKIGKRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEGQTFTIEPIL 325
Query: 678 TLGSTESITWPDHWTTLSADGSPAAQFEHTLLITRTGAEILTIC 547
T+G+TE +TWPD+WTTL+ADG AAQFEHT+LITRTG+EILT C
Sbjct: 326 TIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
>dbj|BAA95761.1| methionine aminopeptidase-like protein [Arabidopsis thaliana]
Length = 342
Score = 252 bits (644), Expect = 6e-66
Identities = 119/162 (73%), Positives = 139/162 (85%)
Frame = -1
Query: 1035 LQNGDIINIDVTVYLNGYHGDTSKTFFCGEVSDAMTNLVKVTEECLEKGIAVCQDGAPFK 856
LQNGDIINIDV VYL+GYHGDTSKTF CG+V+ ++ LVKVTEECLEKGI+VC+DGA FK
Sbjct: 180 LQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEKGISVCKDGASFK 239
Query: 855 KIGKRISEHAEKYGYGVEERFVGHGVGTVFHSEPLIFHHRHDRHGFMVEGQTFTIEPILT 676
+IGK ISEHA KYGY +E RF+GHGVGTV HSEPLI+ H +M+EGQTFT+EPILT
Sbjct: 240 QIGKIISEHAAKYGYNME-RFIGHGVGTVLHSEPLIYLHNDYELEYMIEGQTFTLEPILT 298
Query: 675 LGSTESITWPDHWTTLSADGSPAAQFEHTLLITRTGAEILTI 550
+G+TE +TWPD WT ++ADG PAAQFEHT+LIT TGAEILTI
Sbjct: 299 IGTTEFVTWPDKWTIVTADGGPAAQFEHTILITTTGAEILTI 340
>ref|NP_189202.1| methionine aminopeptidase, putative; protein id: At3g25740.1,
supported by cDNA: gi_11320957 [Arabidopsis thaliana]
Length = 344
Score = 249 bits (635), Expect = 6e-65
Identities = 119/164 (72%), Positives = 141/164 (85%), Gaps = 2/164 (1%)
Frame = -1
Query: 1035 LQNGDIINIDVTVYLNGYHGDTSKTFFCGEVSDAMTNLVKVTEECLEKGIAVCQDGAPFK 856
LQNGDIINIDV VYL+GYHGDTSKTF CG+V+ ++ LVKVTEECLEKGI+VC+DGA FK
Sbjct: 180 LQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEKGISVCKDGASFK 239
Query: 855 KIGKRISEHAEKYGYGVEERFVGHGVGTVFHSEPLIFHHRHDRH--GFMVEGQTFTIEPI 682
+IGK ISEHA KYGY + ERF+GHGVGTV HSEPLI+ H + + +M+EGQTFT+EPI
Sbjct: 240 QIGKIISEHAAKYGYNM-ERFIGHGVGTVLHSEPLIYLHSNYDYELEYMIEGQTFTLEPI 298
Query: 681 LTLGSTESITWPDHWTTLSADGSPAAQFEHTLLITRTGAEILTI 550
LT+G+TE +TWPD WT ++ADG PAAQFEHT+LIT TGAEILTI
Sbjct: 299 LTIGTTEFVTWPDKWTIVTADGGPAAQFEHTILITTTGAEILTI 342
>gb|AAG33976.1|AF250962_1 methionine aminopeptidase-like protein [Arabidopsis thaliana]
Length = 344
Score = 248 bits (632), Expect = 1e-64
Identities = 118/164 (71%), Positives = 141/164 (85%), Gaps = 2/164 (1%)
Frame = -1
Query: 1035 LQNGDIINIDVTVYLNGYHGDTSKTFFCGEVSDAMTNLVKVTEECLEKGIAVCQDGAPFK 856
LQNGDIINIDV VYL+GYHGDTSKTF CG+V+ ++ LVKVTEECLEKGI+VC+DGA FK
Sbjct: 180 LQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEKGISVCKDGASFK 239
Query: 855 KIGKRISEHAEKYGYGVEERFVGHGVGTVFHSEPLIFHHRHDRH--GFMVEGQTFTIEPI 682
+IGK ISEHA KYGY + ERF+GHG+GTV HSEPLI+ H + + +M+EGQTFT+EPI
Sbjct: 240 QIGKIISEHAAKYGYNM-ERFIGHGLGTVLHSEPLIYLHSNYDYELEYMIEGQTFTLEPI 298
Query: 681 LTLGSTESITWPDHWTTLSADGSPAAQFEHTLLITRTGAEILTI 550
LT+G+TE +TWPD WT ++ADG PAAQFEHT+LIT TGAEILTI
Sbjct: 299 LTIGTTEFVTWPDKWTIVTADGGPAAQFEHTILITTTGAEILTI 342
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 891,318,045
Number of Sequences: 1393205
Number of extensions: 20623078
Number of successful extensions: 49791
Number of sequences better than 10.0: 399
Number of HSP's better than 10.0 without gapping: 46269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49393
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60980933767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
