Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007330A_C01 KMC007330A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG43545.1|AF211527_1 Avr9/Cf-9 rapidly elicited protein 1 [N... 152 3e-36
gb|AAG49031.1| ripening regulated protein DDTFR10/A [Lycopersico... 140 1e-32
dbj|BAA97124.1| ethylene-responsive element binding factor [Nico... 137 6e-32
ref|NP_568679.1| ethylene responsive element binding factor 5 (A... 137 1e-31
dbj|BAA97157.1| ethylene responsive element binding factor 5 (AT... 137 1e-31
>gb|AAG43545.1|AF211527_1 Avr9/Cf-9 rapidly elicited protein 1 [Nicotiana tabacum]
Length = 237
Score = 152 bits (383), Expect = 3e-36
Identities = 85/165 (51%), Positives = 108/165 (64%)
Frame = +1
Query: 28 ILEPLNSDISISDYFLPQQVVPSFSKPPRSSSNLSNRKPSLNISIPSINSGLKSNISQSK 207
I+ L IS SDY PQ ++ S SN+S+RKPSL I +P + S
Sbjct: 57 IMLELEPTISSSDYEKPQVIIDLTSP---KLSNVSDRKPSLKIDLPPVKKFEWIGFCNS- 112
Query: 208 ETSFSHQSSSSSSSSDHQTQEEDNNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDT 387
+ QS+S S + Q ++ + +HYRGVR+RPWGK+AAEIRDP R+G+RVWLGTF+T
Sbjct: 113 ----TTQSNSIVSVTMQQKRKTEEKRHYRGVRQRPWGKYAAEIRDPTRRGARVWLGTFNT 168
Query: 388 AIEAAKAYDRAAFKMRGSRAILNFPLEVGNCHEEEESSVVNVVRR 522
A+EAAKAYDRAAFKMRGS+AILNFPLEVG S+V V+R
Sbjct: 169 AVEAAKAYDRAAFKMRGSKAILNFPLEVGKNLSYSSSAVDGGVKR 213
>gb|AAG49031.1| ripening regulated protein DDTFR10/A [Lycopersicon esculentum]
Length = 214
Score = 140 bits (352), Expect = 1e-32
Identities = 73/137 (53%), Positives = 91/137 (66%), Gaps = 8/137 (5%)
Frame = +1
Query: 130 SNRKPSLNISIPSINSGLKSNISQSKETSFSHQSSSSSSSSDHQTQ--------EEDNNK 285
+ RKPSLNISIPS+ K+ ++ E + + + +T+ E K
Sbjct: 2 AGRKPSLNISIPSVK---KTEEPKTGEVKTGEPKTEEPKTGEVKTEYSVKEKMVENSEKK 58
Query: 286 HYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDRAAFKMRGSRAILNFPL 465
YRGVR+RPWGKFAAEIRDP RKG+RVWLGTFDTA++AA AYDRAAF++RGS+AILNFPL
Sbjct: 59 RYRGVRQRPWGKFAAEIRDPTRKGTRVWLGTFDTAMDAAMAYDRAAFRLRGSKAILNFPL 118
Query: 466 EVGNCHEEEESSVVNVV 516
EV N +E NVV
Sbjct: 119 EVSNFKQENHEIEKNVV 135
>dbj|BAA97124.1| ethylene-responsive element binding factor [Nicotiana sylvestris]
Length = 282
Score = 137 bits (346), Expect = 6e-32
Identities = 75/142 (52%), Positives = 94/142 (65%), Gaps = 3/142 (2%)
Frame = +1
Query: 88 VPSFSKPPRSS---SNLSNRKPSLNISIPSINSGLKSNISQSKETSFSHQSSSSSSSSDH 258
+P+ S SS ++ RKPSLNI+IP +K + Q E + + +
Sbjct: 91 IPNVSAARSSSLKQTSFKERKPSLNIAIP-----VKQEVVQKVELAPTEK---------- 135
Query: 259 QTQEEDNNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDRAAFKMRG 438
KHYRGVR+RPWGKFAAEIRDPNRKG+RVWLGTFDTAIEAAKAYDRAA+K+RG
Sbjct: 136 --------KHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRG 187
Query: 439 SRAILNFPLEVGNCHEEEESSV 504
S+AI+NFPLEV N +E + +
Sbjct: 188 SKAIVNFPLEVANFKQEFNNEI 209
>ref|NP_568679.1| ethylene responsive element binding factor 5 (AtERF5); protein id:
At5g47230.1, supported by cDNA: gi_14326511, supported
by cDNA: gi_18700209, supported by cDNA: gi_3434974
[Arabidopsis thaliana] gi|7531111|sp|O80341|ERF5_ARATH
Ethylene responsive element binding factor 5 (AtERF5)
gi|25453553|pir||T52020 ethylene responsive element
binding factor 5 [validated] - Arabidopsis thaliana
gi|3434975|dbj|BAA32422.1| ethylene responsive element
binding factor 5 [Arabidopsis thaliana]
gi|14326512|gb|AAK60301.1|AF385709_1 AT5g47230/MQL5_9
[Arabidopsis thaliana] gi|18700210|gb|AAL77715.1|
AT5g47230/MQL5_9 [Arabidopsis thaliana]
gi|26450221|dbj|BAC42229.1| putative ethylene responsive
element binding factor 5 ATERF5 [Arabidopsis thaliana]
Length = 300
Score = 137 bits (344), Expect = 1e-31
Identities = 75/151 (49%), Positives = 99/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 25 SILEPLNSDISISDY-FLPQQVVPSFSKPPRSSSNLSNRKPSLNISIPSINSGLKSNISQ 201
SI +S++S+SD+ F P + +P S RKP L IS+P+
Sbjct: 83 SIPFEFDSEVSVSDFDFKPSNQNQNQFEPELKSQI---RKPPLKISLPA----------- 128
Query: 202 SKETSFSHQSSSSSSSSDHQTQEEDNNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTF 381
+T + ++ ++ + E+ KHYRGVR+RPWGKFAAEIRDPN++GSRVWLGTF
Sbjct: 129 --KTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTF 186
Query: 382 DTAIEAAKAYDRAAFKMRGSRAILNFPLEVG 474
DTAIEAA+AYD AAF++RGS+AILNFPLEVG
Sbjct: 187 DTAIEAARAYDEAAFRLRGSKAILNFPLEVG 217
>dbj|BAA97157.1| ethylene responsive element binding factor 5 (ATERF5) [Arabidopsis
thaliana]
Length = 329
Score = 137 bits (344), Expect = 1e-31
Identities = 75/151 (49%), Positives = 99/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 25 SILEPLNSDISISDY-FLPQQVVPSFSKPPRSSSNLSNRKPSLNISIPSINSGLKSNISQ 201
SI +S++S+SD+ F P + +P S RKP L IS+P+
Sbjct: 112 SIPFEFDSEVSVSDFDFKPSNQNQNQFEPELKSQI---RKPPLKISLPA----------- 157
Query: 202 SKETSFSHQSSSSSSSSDHQTQEEDNNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTF 381
+T + ++ ++ + E+ KHYRGVR+RPWGKFAAEIRDPN++GSRVWLGTF
Sbjct: 158 --KTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTF 215
Query: 382 DTAIEAAKAYDRAAFKMRGSRAILNFPLEVG 474
DTAIEAA+AYD AAF++RGS+AILNFPLEVG
Sbjct: 216 DTAIEAARAYDEAAFRLRGSKAILNFPLEVG 246
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.312 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,034,100
Number of Sequences: 1393205
Number of extensions: 9825583
Number of successful extensions: 47295
Number of sequences better than 10.0: 815
Number of HSP's better than 10.0 without gapping: 30849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39297
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
