Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007324A_C01 KMC007324A_c01
(581 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_186779.1| putative protein kinase; protein id: At3g01300.... 71 9e-12
ref|NP_197012.1| serine/threonine specific protein kinase -like;... 70 2e-11
gb|AAM64595.1| putative protein kinase [Arabidopsis thaliana] 70 2e-11
dbj|BAC57958.1| serine/threonine protein kinase [Aster tripolium] 58 1e-07
dbj|BAB02184.1| protein kinase [Arabidopsis thaliana] 57 2e-07
>ref|NP_186779.1| putative protein kinase; protein id: At3g01300.1, supported by
cDNA: 30775., supported by cDNA: gi_16209632
[Arabidopsis thaliana]
gi|6094554|gb|AAF03496.1|AC010676_6 putative protein
kinase [Arabidopsis thaliana]
gi|6714459|gb|AAF26145.1|AC008261_2 putative protein
kinase [Arabidopsis thaliana]
Length = 490
Score = 71.2 bits (173), Expect = 9e-12
Identities = 46/109 (42%), Positives = 60/109 (54%), Gaps = 10/109 (9%)
Frame = +1
Query: 283 VVESW--------DVSKSKGRKKKKKEVEGV--VEEEETGCWVGFRFIGSCISSRSKVDS 432
V+E+W + K K R+KK V EEE GCWV FR+I C SS S V++
Sbjct: 8 VMENWQSKTSNENEKKKKKRRRKKNNNVRNSEHYEEEANGCWVKFRYIVCCASSTSDVET 67
Query: 433 SVSGPSSHYAESKSTNYTSRDQQTAPVVPSTTTSNAESNSSTSRLEEEL 579
S++ S+ S+S S DQ PV +TTTSNAES+ ST + EEL
Sbjct: 68 SLT-LSTSTVGSQSAIVQSNDQPVGPVSSTTTTSNAESSLSTPIISEEL 115
>ref|NP_197012.1| serine/threonine specific protein kinase -like; protein id:
At5g15080.1, supported by cDNA: gi_17064887 [Arabidopsis
thaliana] gi|11358839|pir||T51453 serine/threonine
specific protein kinase-like - Arabidopsis thaliana
gi|9755675|emb|CAC01827.1| serine/threonine specific
protein kinase-like [Arabidopsis thaliana]
gi|17064888|gb|AAL32598.1| serine/threonine specific
protein kinase-like [Arabidopsis thaliana]
gi|27311943|gb|AAO00937.1| serine/threonine specific
protein kinase-like [Arabidopsis thaliana]
Length = 493
Score = 70.1 bits (170), Expect = 2e-11
Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Frame = +1
Query: 304 SKSKGRKKK-----KKEVEGVVEEEETGCWVGFRFIGSCISSRSKVD---SSVSGPSSHY 459
+++K KKK K E E E +GCWV FRF+ CI S+S +D SS+ G +
Sbjct: 20 TENKNHKKKNGDDNKSRNEEEEEGEASGCWVKFRFMIGCIPSKSDLDASSSSIYGSNCTV 79
Query: 460 A--ESKSTNYTSRDQQTAPVVPSTTTSNAESNSSTSRLEEEL 579
ESKS N S DQ V +TTTSNAES+SST + EEL
Sbjct: 80 TTMESKSANEKSNDQPVGQVSSTTTTSNAESSSSTPVISEEL 121
>gb|AAM64595.1| putative protein kinase [Arabidopsis thaliana]
Length = 482
Score = 70.1 bits (170), Expect = 2e-11
Identities = 43/93 (46%), Positives = 54/93 (57%), Gaps = 2/93 (2%)
Frame = +1
Query: 307 KSKGRKKKKKEVEGV--VEEEETGCWVGFRFIGSCISSRSKVDSSVSGPSSHYAESKSTN 480
K K R+KK V EEE GCWV FR+I C SS S V++S++ S+ S+S
Sbjct: 16 KKKRRRKKNNNVRNSEHYEEEANGCWVKFRYIVCCASSTSDVETSLT-LSTSTVGSQSAI 74
Query: 481 YTSRDQQTAPVVPSTTTSNAESNSSTSRLEEEL 579
S DQ PV +TTTSNAES+ ST + EEL
Sbjct: 75 VQSNDQPVGPVSSTTTTSNAESSLSTPIISEEL 107
>dbj|BAC57958.1| serine/threonine protein kinase [Aster tripolium]
Length = 439
Score = 57.8 bits (138), Expect = 1e-07
Identities = 36/70 (51%), Positives = 42/70 (59%)
Frame = +1
Query: 370 GCWVGFRFIGSCISSRSKVDSSVSGPSSHYAESKSTNYTSRDQQTAPVVPSTTTSNAESN 549
G + GSC+SSRSKVDSS SG SSH+ E KSTN S+DQ TTSN+E N
Sbjct: 6 GVGINGGLFGSCVSSRSKVDSSTSGISSHF-EIKSTNNVSKDQ--------PTTSNSEHN 56
Query: 550 SSTSRLEEEL 579
T E+EL
Sbjct: 57 LPTLTPEDEL 66
>dbj|BAB02184.1| protein kinase [Arabidopsis thaliana]
Length = 483
Score = 57.0 bits (136), Expect = 2e-07
Identities = 42/101 (41%), Positives = 55/101 (53%), Gaps = 2/101 (1%)
Frame = +1
Query: 283 VVESWDVSKSKGRK--KKKKEVEGVVEEEETGCWVGFRFIGSCISSRSKVDSSVSGPSSH 456
VVE V K + K KKK V+ +E E+G W F+FI SCISSRSKVDSS++ ++
Sbjct: 10 VVEKLGVEKGEKGKMMSKKKNVKKDGDESESGFWFRFKFIFSCISSRSKVDSSMNA-TAV 68
Query: 457 YAESKSTNYTSRDQQTAPVVPSTTTSNAESNSSTSRLEEEL 579
AE K ++ P+ T AES SST + EL
Sbjct: 69 IAEPKKV----IEKLEGHPAPTKDTGCAESGSSTPLMSGEL 105
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,621,565
Number of Sequences: 1393205
Number of extensions: 15237492
Number of successful extensions: 106328
Number of sequences better than 10.0: 1140
Number of HSP's better than 10.0 without gapping: 63316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90865
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
