Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007303A_C01 KMC007303A_c01
(563 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198637.2| protein kinase - like protein; protein id: At5g... 104 7e-22
dbj|BAB11288.1| contains similarity to protein kinase~gene_id:MX... 104 7e-22
pir||E96692 probable wall-associated kinase T4O24.5 [imported] -... 100 2e-20
gb|AAN60342.1| unknown [Arabidopsis thaliana] 100 2e-20
ref|NP_176860.1| protein kinase, putative; protein id: At1g66880... 100 2e-20
>ref|NP_198637.2| protein kinase - like protein; protein id: At5g38210.1, supported
by cDNA: gi_18175790 [Arabidopsis thaliana]
gi|18175791|gb|AAL59928.1| putative protein kinase
[Arabidopsis thaliana] gi|22136902|gb|AAM91795.1|
putative protein kinase [Arabidopsis thaliana]
Length = 686
Score = 104 bits (260), Expect = 7e-22
Identities = 58/117 (49%), Positives = 79/117 (66%), Gaps = 5/117 (4%)
Frame = -1
Query: 563 RERREIKLSTMAIKKIRNGTLHELVDSNLGFESDFKVRKMINAVAELAFQCLQSSKDVRP 384
R R +I L+ MAI KI+N +HEL D +LGF D V+KM+++VAELAF+CLQ +DVRP
Sbjct: 562 RHRHDINLANMAISKIQNDAVHELADLSLGFARDPSVKKMMSSVAELAFRCLQQERDVRP 621
Query: 383 SMAEVLERLRDIQSDGKYESKPEVMDIP---EDDAALLKY--EPPQSPDSNLRNIST 228
SM E++E LR IQ DG +SK V++I DD LLK+ PP SP+++ S+
Sbjct: 622 SMDEIVEVLRVIQKDGISDSKDVVVEIDVNGGDDVGLLKHGVPPPLSPETDKTTASS 678
>dbj|BAB11288.1| contains similarity to protein kinase~gene_id:MXA21.10 [Arabidopsis
thaliana]
Length = 978
Score = 104 bits (260), Expect = 7e-22
Identities = 58/117 (49%), Positives = 79/117 (66%), Gaps = 5/117 (4%)
Frame = -1
Query: 563 RERREIKLSTMAIKKIRNGTLHELVDSNLGFESDFKVRKMINAVAELAFQCLQSSKDVRP 384
R R +I L+ MAI KI+N +HEL D +LGF D V+KM+++VAELAF+CLQ +DVRP
Sbjct: 854 RHRHDINLANMAISKIQNDAVHELADLSLGFARDPSVKKMMSSVAELAFRCLQQERDVRP 913
Query: 383 SMAEVLERLRDIQSDGKYESKPEVMDIP---EDDAALLKY--EPPQSPDSNLRNIST 228
SM E++E LR IQ DG +SK V++I DD LLK+ PP SP+++ S+
Sbjct: 914 SMDEIVEVLRVIQKDGISDSKDVVVEIDVNGGDDVGLLKHGVPPPLSPETDKTTASS 970
>pir||E96692 probable wall-associated kinase T4O24.5 [imported] - Arabidopsis
thaliana gi|12320923|gb|AAG50588.1|AC083891_2
wall-associated kinase, putative [Arabidopsis thaliana]
Length = 907
Score = 100 bits (248), Expect = 2e-20
Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 8/114 (7%)
Frame = -1
Query: 563 RERREIKLSTMAIKKIRNGTLHELVDSNLGFESDFKVRKMINAVAELAFQCLQSSKDVRP 384
R R +I L+ MA+ KI+N LHELVDS+LG+++D +VR+ + AVAELAF+CLQ +DVRP
Sbjct: 782 RHRHDINLANMAVSKIQNNALHELVDSSLGYDNDPEVRRKMMAVAELAFRCLQQERDVRP 841
Query: 383 SMAEVLERLRDIQSDGKYE---SKPEVMDIP---EDDAALLK--YEPPQSPDSN 246
+M E++E LR I+ D K P+V+DI DD LL+ PP SP+++
Sbjct: 842 AMDEIVEILRGIKDDEKKRVLVKSPDVVDIECGGGDDVGLLRNSVPPPISPETD 895
>gb|AAN60342.1| unknown [Arabidopsis thaliana]
Length = 663
Score = 100 bits (248), Expect = 2e-20
Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 8/114 (7%)
Frame = -1
Query: 563 RERREIKLSTMAIKKIRNGTLHELVDSNLGFESDFKVRKMINAVAELAFQCLQSSKDVRP 384
R R +I L+ MA+ KI+N LHELVDS+LGF++D +VR+ + AV+ELAF+CLQ +DVRP
Sbjct: 538 RHRHDINLANMAVSKIQNNALHELVDSSLGFDNDPEVRRKMMAVSELAFRCLQQERDVRP 597
Query: 383 SMAEVLERLRDIQSDGKYE---SKPEVMDIP---EDDAALLK--YEPPQSPDSN 246
+M E++E LR I+ D K P+V+DI DD LL+ PP SP+++
Sbjct: 598 AMDEIVEILRGIKDDEKKRVLVKSPDVVDIECGGGDDVGLLRNSVPPPISPETD 651
>ref|NP_176860.1| protein kinase, putative; protein id: At1g66880.1 [Arabidopsis
thaliana] gi|12597754|gb|AAG60067.1|AC013288_1 protein
kinase, putative [Arabidopsis thaliana]
Length = 1286
Score = 100 bits (248), Expect = 2e-20
Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 8/114 (7%)
Frame = -1
Query: 563 RERREIKLSTMAIKKIRNGTLHELVDSNLGFESDFKVRKMINAVAELAFQCLQSSKDVRP 384
R R +I L+ MA+ KI+N LHELVDS+LG+++D +VR+ + AVAELAF+CLQ +DVRP
Sbjct: 1161 RHRHDINLANMAVSKIQNNALHELVDSSLGYDNDPEVRRKMMAVAELAFRCLQQERDVRP 1220
Query: 383 SMAEVLERLRDIQSDGKYE---SKPEVMDIP---EDDAALLK--YEPPQSPDSN 246
+M E++E LR I+ D K P+V+DI DD LL+ PP SP+++
Sbjct: 1221 AMDEIVEILRGIKDDEKKRVLVKSPDVVDIECGGGDDVGLLRNSVPPPISPETD 1274
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 455,470,193
Number of Sequences: 1393205
Number of extensions: 9417071
Number of successful extensions: 25374
Number of sequences better than 10.0: 240
Number of HSP's better than 10.0 without gapping: 24555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25316
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
