Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006980A_C01 KMC006980A_c01
(600 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182049.1| putative methionine aminopeptidase; protein id:... 177 9e-44
gb|AAM65219.1| putative methionine aminopeptidase [Arabidopsis t... 177 9e-44
gb|AAM94922.1| putative methionine aminopeptidase [Oryza sativa ... 175 3e-43
ref|XP_203968.1| similar to Methionine aminopeptidase 1 (MetAP 1... 144 7e-34
ref|XP_110441.2| methionyl aminopeptidase 1 [Mus musculus] gi|28... 144 7e-34
>ref|NP_182049.1| putative methionine aminopeptidase; protein id: At2g45240.1,
supported by cDNA: 37621., supported by cDNA:
gi_11320953, supported by cDNA: gi_20466152 [Arabidopsis
thaliana] gi|12229672|sp|Q9SLN5|AMP1_ARATH Probable
methionine aminopeptidase 1 (MetAP 1) (Peptidase M 1)
(MAP) gi|25408938|pir||B84888 probable methionine
aminopeptidase [imported] - Arabidopsis thaliana
gi|2583129|gb|AAB82638.1| putative methionine
aminopeptidase [Arabidopsis thaliana]
gi|11320954|gb|AAG33974.1|AF250960_1 methionine
aminopeptidase-like protein [Arabidopsis thaliana]
gi|20466153|gb|AAM20394.1| putative methionine
aminopeptidase [Arabidopsis thaliana]
Length = 398
Score = 177 bits (449), Expect = 9e-44
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2
Query: 599 GHGIGELFHCAPNIPHYARNKAVGVMKAGQIFTIEPMINAGVWRDRMWPDGWTAVTADGK 420
GHGIG+LFHCAPNIPHYARNKAVGVMKAGQ FTIEPMINAG WRDR WPDGWTAVTADGK
Sbjct: 304 GHGIGDLFHCAPNIPHYARNKAVGVMKAGQTFTIEPMINAGGWRDRTWPDGWTAVTADGK 363
Query: 419 RSAQFEHTLLVTETGVEVLTGRLQTSPKVFP 327
RSAQFEHTLLVTETGVEVLT RL +SP V+P
Sbjct: 364 RSAQFEHTLLVTETGVEVLTARLPSSPDVYP 394
>gb|AAM65219.1| putative methionine aminopeptidase [Arabidopsis thaliana]
Length = 398
Score = 177 bits (449), Expect = 9e-44
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = -2
Query: 599 GHGIGELFHCAPNIPHYARNKAVGVMKAGQIFTIEPMINAGVWRDRMWPDGWTAVTADGK 420
GHGIG+LFHCAPNIPHYARNKAVGVMKAGQ FTIEPMINAG WRDR WPDGWTAVTADGK
Sbjct: 304 GHGIGDLFHCAPNIPHYARNKAVGVMKAGQTFTIEPMINAGGWRDRTWPDGWTAVTADGK 363
Query: 419 RSAQFEHTLLVTETGVEVLTGRLQTSPKVFP 327
RSAQFEHTLLVTETGVEVLT RL +SP V+P
Sbjct: 364 RSAQFEHTLLVTETGVEVLTARLPSSPDVYP 394
>gb|AAM94922.1| putative methionine aminopeptidase [Oryza sativa (japonica
cultivar-group)]
Length = 374
Score = 175 bits (444), Expect = 3e-43
Identities = 80/91 (87%), Positives = 84/91 (91%)
Frame = -2
Query: 599 GHGIGELFHCAPNIPHYARNKAVGVMKAGQIFTIEPMINAGVWRDRMWPDGWTAVTADGK 420
GHGIGELFHCAPNIPHY+RNKAVG+MKAGQ FTIEPMIN GVW DR+WPD WTAVTADGK
Sbjct: 280 GHGIGELFHCAPNIPHYSRNKAVGIMKAGQTFTIEPMINTGVWHDRLWPDEWTAVTADGK 339
Query: 419 RSAQFEHTLLVTETGVEVLTGRLQTSPKVFP 327
RSAQFEHTLLVTETGVEVLT RL +SP VFP
Sbjct: 340 RSAQFEHTLLVTETGVEVLTARLPSSPDVFP 370
>ref|XP_203968.1| similar to Methionine aminopeptidase 1 (MetAP 1) (Peptidase M 1)
[Mus musculus]
Length = 272
Score = 144 bits (364), Expect = 7e-34
Identities = 65/86 (75%), Positives = 74/86 (85%)
Frame = -2
Query: 599 GHGIGELFHCAPNIPHYARNKAVGVMKAGQIFTIEPMINAGVWRDRMWPDGWTAVTADGK 420
GHGI +LFH APN+PHYA+NKAVGVMK+G +FTIEPMI G W+D WPDGWTAVT DGK
Sbjct: 179 GHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGK 238
Query: 419 RSAQFEHTLLVTETGVEVLTGRLQTS 342
RSAQFEHTLLVT+TG E+LT RL +S
Sbjct: 239 RSAQFEHTLLVTDTGCEILTRRLDSS 264
>ref|XP_110441.2| methionyl aminopeptidase 1 [Mus musculus]
gi|28202007|ref|NP_780433.1| methionyl aminopeptidase 1
[Mus musculus] gi|26346625|dbj|BAC36961.1| unnamed
protein product [Mus musculus]
Length = 386
Score = 144 bits (364), Expect = 7e-34
Identities = 65/86 (75%), Positives = 74/86 (85%)
Frame = -2
Query: 599 GHGIGELFHCAPNIPHYARNKAVGVMKAGQIFTIEPMINAGVWRDRMWPDGWTAVTADGK 420
GHGI +LFH APN+PHYA+NKAVGVMK+G +FTIEPMI G W+D WPDGWTAVT DGK
Sbjct: 293 GHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGK 352
Query: 419 RSAQFEHTLLVTETGVEVLTGRLQTS 342
RSAQFEHTLLVT+TG E+LT RL +S
Sbjct: 353 RSAQFEHTLLVTDTGCEILTRRLDSS 378
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 505,370,390
Number of Sequences: 1393205
Number of extensions: 10498071
Number of successful extensions: 23900
Number of sequences better than 10.0: 225
Number of HSP's better than 10.0 without gapping: 23256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23810
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
