Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006957A_C01 KMC006957A_c01
(426 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T13423 hypothetical protein 30B8.4 - fruit fly (Drosophila ... 33 1.1
ref|NP_525045.2| pecanex CG3443-PB gi|22831564|gb|AAF45756.2| CG... 33 1.1
gb|EAA06040.1| ebiP5643 [Anopheles gambiae str. PEST] 32 1.4
gb|ZP_00027013.1| hypothetical protein [Ralstonia metallidurans] 32 1.8
ref|NP_473342.1| hypothetical protein [Plasmodium falciparum 3D7... 31 4.1
>pir||T13423 hypothetical protein 30B8.4 - fruit fly (Drosophila melanogaster)
gi|2827499|emb|CAA15708.1| EG:30B8.4 [Drosophila
melanogaster]
Length = 3345
Score = 32.7 bits (73), Expect = 1.1
Identities = 16/38 (42%), Positives = 19/38 (49%)
Frame = -1
Query: 384 IKVD*EENDGCCCCCLGRSKNYFFDWLEETTMVTNRWL 271
I D E+NDGCCCC G + L M + RWL
Sbjct: 2123 ITEDVEDNDGCCCCDPG----HLPQLLSANAMFSTRWL 2156
>ref|NP_525045.2| pecanex CG3443-PB gi|22831564|gb|AAF45756.2| CG3443-PB [Drosophila
melanogaster]
Length = 3433
Score = 32.7 bits (73), Expect = 1.1
Identities = 16/38 (42%), Positives = 19/38 (49%)
Frame = -1
Query: 384 IKVD*EENDGCCCCCLGRSKNYFFDWLEETTMVTNRWL 271
I D E+NDGCCCC G + L M + RWL
Sbjct: 2211 ITEDVEDNDGCCCCDPG----HLPQLLSANAMFSTRWL 2244
>gb|EAA06040.1| ebiP5643 [Anopheles gambiae str. PEST]
Length = 1716
Score = 32.3 bits (72), Expect = 1.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 369 EENDGCCCCCLGRSKNYFFDWLEETTMVTNRWL 271
E+N GCCCC +G L M T RWL
Sbjct: 1055 EDNIGCCCCTIGHLPR----MLSANAMFTTRWL 1083
>gb|ZP_00027013.1| hypothetical protein [Ralstonia metallidurans]
Length = 378
Score = 32.0 bits (71), Expect = 1.8
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 216 SKAHDAVKSAAYHNKREASATG**PWWFLLASQKNSSYFYPDSSSSIHHFLPSPLLCQG- 392
+KA A + A + + T WF A SS +P+++ I HFLPS +L G
Sbjct: 220 AKAQAAGSTGALRREEDVLDT-----WFSSALVPFSSLGWPENTPEIQHFLPSSVLVTGY 274
Query: 393 --ILYW 404
I +W
Sbjct: 275 DIIFFW 280
>ref|NP_473342.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|4493989|emb|CAB39048.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 433
Score = 30.8 bits (68), Expect = 4.1
Identities = 19/55 (34%), Positives = 31/55 (55%), Gaps = 6/55 (10%)
Frame = +2
Query: 8 KQLLKH---LLESNKGTSPLWN---DHHQWAYFWSIIGSIFNQHQGFN*WIFNEN 154
K ++K+ L+ +KG S L++ + H+ +FWS + SI GFN I+N N
Sbjct: 249 KNIIKNKLVLIGFSKGCSVLFSLLRESHEGPFFWSYVDSIIFLDPGFNKNIYNIN 303
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 359,242,235
Number of Sequences: 1393205
Number of extensions: 7531635
Number of successful extensions: 13644
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13514
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 6856422288
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
