Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006744A_C01 KMC006744A_c01
(654 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191196.1| leucine-rich repeat transmembrane protein kinas... 107 1e-22
gb|AAL49790.1| unknown protein [Arabidopsis thaliana] 105 7e-22
ref|NP_195809.1| leucine-rich repeat transmembrane protein kinas... 98 9e-20
gb|AAO26311.1| receptor-like protein kinase [Elaeis guineensis] 94 2e-18
ref|NP_189443.1| leucine-rich repeat transmembrane protein kinas... 76 3e-13
>ref|NP_191196.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g56370.1, supported by cDNA: gi_17979044,
supported by cDNA: gi_19032340 [Arabidopsis thaliana]
gi|11358383|pir||T49038 hypothetical protein T5P19.20 -
Arabidopsis thaliana gi|7594515|emb|CAB88040.1| putative
protein [Arabidopsis thaliana]
gi|19032341|dbj|BAB85646.1| inflorescence and root
apices receptor-like kinase [Arabidopsis thaliana]
gi|19032343|dbj|BAB85647.1| inflorescence and root
apices receptor-like kinase [Arabidopsis thaliana]
Length = 964
Score = 107 bits (268), Expect = 1e-22
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = +1
Query: 421 LLFLIVFVQVLLPVFSGGPGFSDDVLGLIVFKAGLQDPNHRLSSWNEDDYSPCNWEGVKC 600
L+F ++ V + PV S P +DDVLGLIVFKA L+DP +L+SWNEDDY+PC+W GVKC
Sbjct: 5 LIFTVLLVSAVAPVRSLDPPLNDDVLGLIVFKADLRDPEQKLASWNEDDYTPCSWNGVKC 64
Query: 601 DPSTNRVSSLILDGFSLS 654
P TNRV+ L LDGFSLS
Sbjct: 65 HPRTNRVTELNLDGFSLS 82
>gb|AAL49790.1| unknown protein [Arabidopsis thaliana]
Length = 964
Score = 105 bits (261), Expect = 7e-22
Identities = 48/78 (61%), Positives = 59/78 (75%)
Frame = +1
Query: 421 LLFLIVFVQVLLPVFSGGPGFSDDVLGLIVFKAGLQDPNHRLSSWNEDDYSPCNWEGVKC 600
L+F ++ V + PV S P + DVLGLIVFKA L+DP +L+SWNEDDY+PC+W GVKC
Sbjct: 5 LIFTVLLVSAVAPVRSLDPPLNGDVLGLIVFKADLRDPEQKLASWNEDDYTPCSWNGVKC 64
Query: 601 DPSTNRVSSLILDGFSLS 654
P TNRV+ L LDGFSLS
Sbjct: 65 HPRTNRVTELNLDGFSLS 82
>ref|NP_195809.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g01890.1, supported by cDNA: gi_15983377
[Arabidopsis thaliana] gi|11358137|pir||T48210
hypothetical protein T20L15.160 - Arabidopsis thaliana
gi|7329662|emb|CAB82759.1| putative protein [Arabidopsis
thaliana] gi|15983378|gb|AAL11557.1|AF424563_1
AT5g01890/T20L15_160 [Arabidopsis thaliana]
gi|28416471|gb|AAO42766.1| At5g01890/T20L15_160
[Arabidopsis thaliana]
Length = 967
Score = 98.2 bits (243), Expect = 9e-20
Identities = 48/85 (56%), Positives = 55/85 (64%)
Frame = +1
Query: 400 FSKCIHLLLFLIVFVQVLLPVFSGGPGFSDDVLGLIVFKAGLQDPNHRLSSWNEDDYSPC 579
F+ + LL + V P F+DDVLGLIVFKAGL DP +LSSWN +DY PC
Sbjct: 2 FNGAVSLLFLFLAVVSA-----RADPTFNDDVLGLIVFKAGLDDPLSKLSSWNSEDYDPC 56
Query: 580 NWEGVKCDPSTNRVSSLILDGFSLS 654
NW G CDP+TNRVS L LD FSLS
Sbjct: 57 NWVGCTCDPATNRVSELRLDAFSLS 81
>gb|AAO26311.1| receptor-like protein kinase [Elaeis guineensis]
Length = 938
Score = 93.6 bits (231), Expect = 2e-18
Identities = 45/80 (56%), Positives = 56/80 (69%), Gaps = 2/80 (2%)
Frame = +1
Query: 421 LLFLIVFVQVLLPVF--SGGPGFSDDVLGLIVFKAGLQDPNHRLSSWNEDDYSPCNWEGV 594
LL I + + LP S P +DDVLGLIVFKA L++P+ +L SWNEDD PC W G+
Sbjct: 4 LLLRIFYFVIFLPFLAESRNPALNDDVLGLIVFKADLREPDSKLVSWNEDDDEPCCWTGI 63
Query: 595 KCDPSTNRVSSLILDGFSLS 654
KC+P TNRV+ L L+GFSLS
Sbjct: 64 KCEPKTNRVTELSLNGFSLS 83
>ref|NP_189443.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g28040.1 [Arabidopsis thaliana]
Length = 997
Score = 76.3 bits (186), Expect = 3e-13
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +1
Query: 484 SDDVLGLIVFKAGLQDPNHRLSSWNEDDYSPCNWEGVKCDPSTNRVSSLILDGFSLS 654
+DDVLGLIVFK+ L DP L SW EDD +PC+W VKC+P T+RV L LDG +L+
Sbjct: 15 NDDVLGLIVFKSDLNDPFSHLESWTEDDNTPCSWSYVKCNPKTSRVIELSLDGLALT 71
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 568,241,421
Number of Sequences: 1393205
Number of extensions: 12541929
Number of successful extensions: 44448
Number of sequences better than 10.0: 374
Number of HSP's better than 10.0 without gapping: 39464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43317
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
