Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006493A_C01 KMC006493A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197941.1| putative protein; protein id: At5g25590.1 [Arab... 108 6e-23
ref|NP_564604.1| bZIP protein, putative; protein id: At1g52320.1... 74 9e-13
pir||D96563 probable bZIP protein, 48652-45869 [imported] - Arab... 74 9e-13
dbj|BAB64061.1| putative bZIP (leucine zipper) protein [Oryza sa... 64 2e-09
dbj|BAC16409.1| bZIP protein-like [Oryza sativa (japonica cultiv... 53 3e-06
>ref|NP_197941.1| putative protein; protein id: At5g25590.1 [Arabidopsis thaliana]
gi|20259508|gb|AAM13874.1| unknown protein [Arabidopsis
thaliana] gi|22136982|gb|AAM91720.1| unknown protein
[Arabidopsis thaliana]
Length = 775
Score = 108 bits (269), Expect = 6e-23
Identities = 55/91 (60%), Positives = 71/91 (77%), Gaps = 2/91 (2%)
Frame = -3
Query: 558 LMRRAPDEPDHERGEEVNTNNP--VSEKRFVVESLQKRLEEEVESHQKLCIQVREKSLQS 385
L +R P E + E G++ T++ V+E+R VE+L+KRLEEE E+HQ+ C+QVREKSL S
Sbjct: 674 LQKRGPTE-EAEGGDDATTSSRDHVTERRIAVETLKKRLEEEEEAHQRHCVQVREKSLNS 732
Query: 384 LKTRLPELFRALSDYTHACADGYEKLKSITQ 292
LK RLPE+FRALSDY HACAD YEKL+ I+Q
Sbjct: 733 LKIRLPEIFRALSDYAHACADSYEKLRIISQ 763
>ref|NP_564604.1| bZIP protein, putative; protein id: At1g52320.1, supported by cDNA:
gi_15450410 [Arabidopsis thaliana]
gi|15450411|gb|AAK96499.1| At1g52320/F19K6_7
[Arabidopsis thaliana] gi|23308427|gb|AAN18183.1|
At1g52320/F19K6_7 [Arabidopsis thaliana]
Length = 398
Score = 74.3 bits (181), Expect = 9e-13
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = -3
Query: 543 PDEPDHERGEEVNTNNPVSEKRFVVESLQKRLEEEVESHQKLCIQVREKSLQSLKTRLPE 364
PDE D++ +EV + ++F VE ++KRLEEE E++ + QVREKSL SL+TRLPE
Sbjct: 304 PDEADNDHNDEV------AVRQFNVEQIKKRLEEEEEAYHRQSHQVREKSLASLRTRLPE 357
Query: 363 LFRALSDYTHACADGYEKL 307
LF+A+S+ ++C+D Y +
Sbjct: 358 LFQAMSEVAYSCSDMYRAI 376
>pir||D96563 probable bZIP protein, 48652-45869 [imported] - Arabidopsis
thaliana gi|12323124|gb|AAG51544.1|AC037424_9 bZIP
protein, putative; 48652-45869 [Arabidopsis thaliana]
Length = 798
Score = 74.3 bits (181), Expect = 9e-13
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = -3
Query: 543 PDEPDHERGEEVNTNNPVSEKRFVVESLQKRLEEEVESHQKLCIQVREKSLQSLKTRLPE 364
PDE D++ +EV + ++F VE ++KRLEEE E++ + QVREKSL SL+TRLPE
Sbjct: 704 PDEADNDHNDEV------AVRQFNVEQIKKRLEEEEEAYHRQSHQVREKSLASLRTRLPE 757
Query: 363 LFRALSDYTHACADGYEKL 307
LF+A+S+ ++C+D Y +
Sbjct: 758 LFQAMSEVAYSCSDMYRAI 776
>dbj|BAB64061.1| putative bZIP (leucine zipper) protein [Oryza sativa (japonica
cultivar-group)]
Length = 762
Score = 63.5 bits (153), Expect = 2e-09
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -3
Query: 540 DEPDHERGEEVNTNNPVSEKRFVVESLQKRLEEEVESHQKLCIQVREKSLQSLKTRLPEL 361
D + E E VN++ PV++++ +E ++ RL EE+ H ++ QVREKSL +L+ LPEL
Sbjct: 673 DANNSEVAEAVNSD-PVADRKTAIEEVEIRLREEMGHHNRIARQVREKSLANLRMHLPEL 731
Query: 360 FRALSDYTHACADGYEKL-KSITQPR 286
FR ++D+ C + Y L KS P+
Sbjct: 732 FRNMTDFAGFCYEMYSNLRKSAVLPK 757
>dbj|BAC16409.1| bZIP protein-like [Oryza sativa (japonica cultivar-group)]
Length = 737
Score = 52.8 bits (125), Expect = 3e-06
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = -3
Query: 498 NPVSEKRFVVESLQKRLEEEVESHQKLCIQVREKSLQSLKTRLPELFRALSDYTHACADG 319
+P++E++ +E L+ ++E E + K C VREKSL L+T LPELFR +SD++ A
Sbjct: 662 DPMAERKAAMEKLELSMKELEEMYVKQCRVVREKSLSLLRTNLPELFRVVSDFSLQSAGM 721
Query: 318 YEKLKSI 298
++ + SI
Sbjct: 722 FKGVWSI 728
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,626,480
Number of Sequences: 1393205
Number of extensions: 8470804
Number of successful extensions: 21731
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 20798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21658
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
