Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006461A_C01 KMC006461A_c01
(697 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK55470.1|AC084295_3 putative phosphoinositide kinase [Oryza... 218 8e-56
ref|NP_195050.1| putative protein; protein id: At4g33240.1 [Arab... 217 1e-55
ref|NP_188044.1| unknown protein; protein id: At3g14270.1 [Arabi... 216 2e-55
dbj|BAC24937.1| P0479C08.11 [Oryza sativa (japonica cultivar-gro... 186 3e-46
ref|NP_177257.2| unknown protein; protein id: At1g71010.1, suppo... 185 5e-46
>gb|AAK55470.1|AC084295_3 putative phosphoinositide kinase [Oryza sativa]
Length = 1702
Score = 218 bits (554), Expect = 8e-56
Identities = 102/127 (80%), Positives = 115/127 (90%)
Frame = -3
Query: 695 PTSPIFVGNKAKRLLERXVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTW 516
PTSPIFVGNKAKRLLER VWNDTAFLASI VMDYSLLVGVDE+KHELV+GIIDFMRQYTW
Sbjct: 1575 PTSPIFVGNKAKRLLERAVWNDTAFLASIGVMDYSLLVGVDEKKHELVMGIIDFMRQYTW 1634
Query: 515 DKHLESWVKTTGILGGPKNASPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPGLNPTGSQ 336
DKHLE+WVKT+GILGGPKN +PTVISP+QYK RFRKAMS YFL+VPDQWSPP + P+
Sbjct: 1635 DKHLETWVKTSGILGGPKNVAPTVISPKQYKMRFRKAMSTYFLVVPDQWSPPAVVPSKQG 1694
Query: 335 SDHCDEN 315
+++ +N
Sbjct: 1695 AENNQDN 1701
>ref|NP_195050.1| putative protein; protein id: At4g33240.1 [Arabidopsis thaliana]
gi|7486447|pir||T05204 hypothetical protein F4I10.170 -
Arabidopsis thaliana gi|4455338|emb|CAB36798.1| putative
protein [Arabidopsis thaliana] gi|7270272|emb|CAB80041.1|
putative protein [Arabidopsis thaliana]
Length = 1757
Score = 217 bits (553), Expect = 1e-55
Identities = 102/126 (80%), Positives = 115/126 (90%)
Frame = -3
Query: 695 PTSPIFVGNKAKRLLERXVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTW 516
PTSPIFVG+KAKRLLER VWNDT+FLASI+VMDYSLLVGVDEE++ELVLGIIDFMRQYTW
Sbjct: 1618 PTSPIFVGSKAKRLLERAVWNDTSFLASIHVMDYSLLVGVDEERNELVLGIIDFMRQYTW 1677
Query: 515 DKHLESWVKTTGILGGPKNASPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPGLNPTGSQ 336
DKHLE+WVKT+G+LGGPKN++PTVISPQQYKKRFRKAM+ YFLMVPDQWSP + P+ S
Sbjct: 1678 DKHLETWVKTSGLLGGPKNSTPTVISPQQYKKRFRKAMTAYFLMVPDQWSPAAVVPSNSS 1737
Query: 335 SDHCDE 318
S E
Sbjct: 1738 SAEVKE 1743
>ref|NP_188044.1| unknown protein; protein id: At3g14270.1 [Arabidopsis thaliana]
gi|9279575|dbj|BAB01033.1|
emb|CAB36798.1~gene_id:MLN21.6~strong similarity to
unknown protein [Arabidopsis thaliana]
Length = 1791
Score = 216 bits (550), Expect = 2e-55
Identities = 105/131 (80%), Positives = 114/131 (86%)
Frame = -3
Query: 695 PTSPIFVGNKAKRLLERXVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTW 516
PTSPIFVGNKAKRLLER VWNDTAFLA VMDYSLLVGVDEEK+ELVLGIIDF+RQYTW
Sbjct: 1657 PTSPIFVGNKAKRLLERAVWNDTAFLALGDVMDYSLLVGVDEEKNELVLGIIDFLRQYTW 1716
Query: 515 DKHLESWVKTTGILGGPKNASPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPGLNPTGSQ 336
DKHLESWVK TGILGGPKN +PTVISP+QYK+RFRKAM+ YFLMVPDQWSPP + S+
Sbjct: 1717 DKHLESWVKFTGILGGPKNEAPTVISPKQYKRRFRKAMTTYFLMVPDQWSPPNVVANNSK 1776
Query: 335 SDHCDENS*GG 303
SD +E S G
Sbjct: 1777 SDQPEETSQAG 1787
>dbj|BAC24937.1| P0479C08.11 [Oryza sativa (japonica cultivar-group)]
Length = 1630
Score = 186 bits (472), Expect = 3e-46
Identities = 87/109 (79%), Positives = 97/109 (88%)
Frame = -3
Query: 692 TSPIFVGNKAKRLLERXVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTWD 513
T PIF+G+KAKR LER VWNDT+FLA+ VMDYSLLVG+DEEK ELV+GIID++RQYTWD
Sbjct: 1521 TKPIFLGSKAKRRLERAVWNDTSFLATADVMDYSLLVGIDEEKKELVIGIIDYLRQYTWD 1580
Query: 512 KHLESWVKTTGILGGPKNASPTVISPQQYKKRFRKAMSLYFLMVPDQWS 366
K LE+WVK +GILGGPKN SPTVISP QYKKRFRKAMS YFL VPDQWS
Sbjct: 1581 KQLETWVKASGILGGPKNESPTVISPMQYKKRFRKAMSKYFLTVPDQWS 1629
>ref|NP_177257.2| unknown protein; protein id: At1g71010.1, supported by cDNA:
gi_17473835 [Arabidopsis thaliana]
gi|17473836|gb|AAL38344.1| unknown protein [Arabidopsis
thaliana]
Length = 793
Score = 185 bits (470), Expect = 5e-46
Identities = 84/109 (77%), Positives = 98/109 (89%)
Frame = -3
Query: 692 TSPIFVGNKAKRLLERXVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTWD 513
T PIF+G+KAKR LER +WNDT FLAS+ VMDYSLLVG DEE+ ELVLGIIDFMRQYTWD
Sbjct: 684 TEPIFLGSKAKRSLERAIWNDTNFLASVDVMDYSLLVGFDEERKELVLGIIDFMRQYTWD 743
Query: 512 KHLESWVKTTGILGGPKNASPTVISPQQYKKRFRKAMSLYFLMVPDQWS 366
KHLE+WVK +GILGGPKNASPT++SP+QYK+RFRKAM+ YFL VP+ W+
Sbjct: 744 KHLETWVKASGILGGPKNASPTIVSPKQYKRRFRKAMTTYFLTVPEPWT 792
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 645,541,958
Number of Sequences: 1393205
Number of extensions: 14796447
Number of successful extensions: 32296
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 31206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32269
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31684559424
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
