Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006324A_C01 KMC006324A_c01
(450 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172602.1| serine/threonine kinase, putative; protein id: ... 82 1e-15
gb|AAC95353.1| receptor-like protein kinase [Arabidopsis thaliana] 82 1e-15
gb|AAF16650.1|AC011661_28 T23J18.2 [Arabidopsis thaliana] 82 1e-15
pir||H86246 hypothetical protein [imported] - Arabidopsis thalia... 80 4e-15
ref|NP_172597.1| serine/threonine kinase, putative; protein id: ... 79 2e-14
>ref|NP_172602.1| serine/threonine kinase, putative; protein id: At1g11350.1
[Arabidopsis thaliana]
Length = 830
Score = 82.4 bits (202), Expect = 1e-15
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = -2
Query: 437 ENHILRCIHIAFLCVQEVHKTRPTMTTVVLMLNSEISSLPPPKQVGFVQKQNSSSVESSS 258
EN I RC+H+ LCVQ+ RP++ TV+ ML+SE S+LP PKQ F+ ++ +S VESS
Sbjct: 752 ENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPAFIPRRGTSEVESSG 811
Query: 257 QENQCNSSNNVTITEVQGR 201
Q + S NNV++T++ GR
Sbjct: 812 QSDPRASINNVSLTKITGR 830
>gb|AAC95353.1| receptor-like protein kinase [Arabidopsis thaliana]
Length = 830
Score = 82.4 bits (202), Expect = 1e-15
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = -2
Query: 437 ENHILRCIHIAFLCVQEVHKTRPTMTTVVLMLNSEISSLPPPKQVGFVQKQNSSSVESSS 258
EN I RC+H+ LCVQ+ RP++ TV+ ML+SE S+LP PKQ F+ ++ +S VESS
Sbjct: 752 ENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPAFIPRRGTSEVESSG 811
Query: 257 QENQCNSSNNVTITEVQGR 201
Q + S NNV++T++ GR
Sbjct: 812 QSDPRASINNVSLTKITGR 830
>gb|AAF16650.1|AC011661_28 T23J18.2 [Arabidopsis thaliana]
Length = 809
Score = 82.4 bits (202), Expect = 1e-15
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = -2
Query: 437 ENHILRCIHIAFLCVQEVHKTRPTMTTVVLMLNSEISSLPPPKQVGFVQKQNSSSVESSS 258
EN I RC+H+ LCVQ+ RP++ TV+ ML+SE S+LP PKQ F+ ++ +S VESS
Sbjct: 731 ENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLPEPKQPAFIPRRGTSEVESSG 790
Query: 257 QENQCNSSNNVTITEVQGR 201
Q + S NNV++T++ GR
Sbjct: 791 QSDPRASINNVSLTKITGR 809
>pir||H86246 hypothetical protein [imported] - Arabidopsis thaliana
gi|5734728|gb|AAD49993.1|AC007259_6 Very similar to
receptor-like protein kinases [Arabidopsis thaliana]
Length = 820
Score = 80.5 bits (197), Expect = 4e-15
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = -2
Query: 437 ENHILRCIHIAFLCVQEVHKTRPTMTTVVLMLNSEISSLPPPKQVGFVQKQNSSSVESSS 258
E I +CIHI LCVQE RP+++TV ML+SEI+ +P PKQ F+ + N ESS
Sbjct: 742 EKEIHKCIHIGLLCVQEAANDRPSVSTVCSMLSSEIADIPEPKQPAFISRNNVPEAESSE 801
Query: 257 QENQCNSSNNVTITEVQGR 201
+ +S NNVTIT+V GR
Sbjct: 802 NSDLKDSINNVTITDVTGR 820
>ref|NP_172597.1| serine/threonine kinase, putative; protein id: At1g11300.1
[Arabidopsis thaliana]
Length = 1635
Score = 78.6 bits (192), Expect = 2e-14
Identities = 38/78 (48%), Positives = 50/78 (63%)
Frame = -2
Query: 437 ENHILRCIHIAFLCVQEVHKTRPTMTTVVLMLNSEISSLPPPKQVGFVQKQNSSSVESSS 258
E I +CIHI LCVQE RP+++TV ML+SEI+ +P PKQ F+ + N ESS
Sbjct: 727 EKEIHKCIHIGLLCVQEAANDRPSVSTVCSMLSSEIADIPEPKQPAFISRNNVPEAESSE 786
Query: 257 QENQCNSSNNVTITEVQG 204
+ +S NNVTIT+V G
Sbjct: 787 NSDLKDSINNVTITDVTG 804
Score = 72.4 bits (176), Expect = 1e-12
Identities = 35/79 (44%), Positives = 49/79 (61%)
Frame = -2
Query: 437 ENHILRCIHIAFLCVQEVHKTRPTMTTVVLMLNSEISSLPPPKQVGFVQKQNSSSVESSS 258
E I +C+HIA LCVQ+ RP+++TV +ML+SE++ +P PKQ F+ + E S
Sbjct: 1557 EKEIRKCVHIALLCVQDAANDRPSVSTVCMMLSSEVADIPEPKQPAFMPRNVGLEAEFSE 1616
Query: 257 QENQCNSSNNVTITEVQGR 201
S NNVTIT+V GR
Sbjct: 1617 SIALKASINNVTITDVSGR 1635
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 364,249,932
Number of Sequences: 1393205
Number of extensions: 6921827
Number of successful extensions: 18778
Number of sequences better than 10.0: 341
Number of HSP's better than 10.0 without gapping: 17841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18678
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 6588926928
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
