Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006294A_C01 KMC006294A_c01
(539 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176757.1| hypothetical protein; protein id: At1g65810.1 [... 43 0.002
pir||C96682 protein F1E22.16 [imported] - Arabidopsis thaliana g... 43 0.002
pir||B96682 protein F1E22.14 [imported] - Arabidopsis thaliana g... 42 0.006
ref|NP_176754.1| hypothetical protein; protein id: At1g65780.1 [... 42 0.006
sp|Q00468|CAO2_CANMA Acyl-coenzyme A oxidase POX2 (Acyl-CoA oxid... 33 2.9
>ref|NP_176757.1| hypothetical protein; protein id: At1g65810.1 [Arabidopsis thaliana]
Length = 1050
Score = 43.1 bits (100), Expect = 0.002
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = -2
Query: 538 EENSRYAQFLRIWDVLHLSEVSRLPGDIKISYRNYYPDVLGWCKFRSYDGNFVNPVIWSA 359
+ N+++ Q L+IW VL ++VSR+ ++ YR Y + C++ G+ V P+ W
Sbjct: 930 KNNNQHVQVLKIWQVLPSTDVSRVTEHLEKHYRRYTKGKISRCRYICSQGDLVVPMQWPV 989
Query: 358 NLN 350
+ N
Sbjct: 990 DSN 992
>pir||C96682 protein F1E22.16 [imported] - Arabidopsis thaliana
gi|6686402|gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis
thaliana]
Length = 1075
Score = 43.1 bits (100), Expect = 0.002
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = -2
Query: 538 EENSRYAQFLRIWDVLHLSEVSRLPGDIKISYRNYYPDVLGWCKFRSYDGNFVNPVIWSA 359
+ N+++ Q L+IW VL ++VSR+ ++ YR Y + C++ G+ V P+ W
Sbjct: 955 KNNNQHVQVLKIWQVLPSTDVSRVTEHLEKHYRRYTKGKISRCRYICSQGDLVVPMQWPV 1014
Query: 358 NLN 350
+ N
Sbjct: 1015 DSN 1017
>pir||B96682 protein F1E22.14 [imported] - Arabidopsis thaliana
gi|6686403|gb|AAF23837.1|AC007234_9 F1E22.14 [Arabidopsis
thaliana]
Length = 1076
Score = 41.6 bits (96), Expect = 0.006
Identities = 20/59 (33%), Positives = 32/59 (53%)
Frame = -2
Query: 538 EENSRYAQFLRIWDVLHLSEVSRLPGDIKISYRNYYPDVLGWCKFRSYDGNFVNPVIWS 362
+E+ Y Q L+IWDV+ S+ + +++ NY D + CK R G+ V P+ WS
Sbjct: 938 KEDFHYDQVLKIWDVVPSSDAPEALKRLDLNHTNYTKDEIEKCKARCIRGDIVVPMRWS 996
>ref|NP_176754.1| hypothetical protein; protein id: At1g65780.1 [Arabidopsis thaliana]
Length = 1065
Score = 41.6 bits (96), Expect = 0.006
Identities = 20/59 (33%), Positives = 32/59 (53%)
Frame = -2
Query: 538 EENSRYAQFLRIWDVLHLSEVSRLPGDIKISYRNYYPDVLGWCKFRSYDGNFVNPVIWS 362
+E+ Y Q L+IWDV+ S+ + +++ NY D + CK R G+ V P+ WS
Sbjct: 938 KEDFHYDQVLKIWDVVPSSDAPEALKRLDLNHTNYTKDEIEKCKARCIRGDIVVPMRWS 996
>sp|Q00468|CAO2_CANMA Acyl-coenzyme A oxidase POX2 (Acyl-CoA oxidase) (AOX)
gi|2117542|pir||JC4563 acyl-CoA oxidase (EC 1.3.3.6) -
yeast (Candida maltosa) gi|416287|dbj|BAA04761.1| acyl
coA oxidase [Candida maltosa] gi|1586542|prf||2204239A
acyl-CoA oxidase
Length = 724
Score = 32.7 bits (73), Expect = 2.9
Identities = 19/44 (43%), Positives = 26/44 (58%), Gaps = 1/44 (2%)
Frame = -2
Query: 397 YDGN-FVNPVIWSANLNDPTNYNPPRADPSEFLCNELASLGLRD 269
YDGN + N + N+NDPTNY P ++ E + N ASL R+
Sbjct: 668 YDGNVYTNYLTNVTNVNDPTNYKAPYSEALEAMLNR-ASLEERE 710
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,054,439
Number of Sequences: 1393205
Number of extensions: 9112006
Number of successful extensions: 20699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20691
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
