Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005778A_C01 KMC005778A_c01
(1005 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD10779.2| lipoxygenase [Prunus dulcis] 210 3e-53
gb|AAK50778.2|AF361893_1 bacterial-induced lipoxygenase [Gossypi... 209 4e-53
emb|CAD10740.1| lipoxygenase [Corylus avellana] 209 5e-53
emb|CAB94852.1| lipoxygenase [Prunus dulcis] 207 3e-52
gb|AAO03558.1| lipoxygenase 1 [Brassica napus] 197 2e-49
>emb|CAD10779.2| lipoxygenase [Prunus dulcis]
Length = 862
Score = 210 bits (534), Expect = 3e-53
Identities = 91/110 (82%), Positives = 101/110 (91%)
Frame = +3
Query: 675 QDPTSRHGLRLLIEDYPYAVDGLEIWFAIRTWVQDYXSFYYKTDDTVKEDAELQSWWKEL 854
+D S HGLRLLIEDYPYAVDG+EIWFAI+TWV+DY SFYYKTDD ++ED ELQSWWKEL
Sbjct: 617 KDANSPHGLRLLIEDYPYAVDGIEIWFAIKTWVEDYCSFYYKTDDIIQEDTELQSWWKEL 676
Query: 855 REEGHGDKKDEPWWPKMQTREELIESCTIIIWVASALHAATNFGQYPYAG 1004
EEGHGDKKDEPWWPKMQTRE+L+E+CTIIIW ASALHAA NFGQ+PYAG
Sbjct: 677 VEEGHGDKKDEPWWPKMQTREDLVETCTIIIWTASALHAAVNFGQFPYAG 726
>gb|AAK50778.2|AF361893_1 bacterial-induced lipoxygenase [Gossypium hirsutum]
Length = 865
Score = 209 bits (533), Expect = 4e-53
Identities = 93/109 (85%), Positives = 101/109 (92%)
Frame = +3
Query: 678 DPTSRHGLRLLIEDYPYAVDGLEIWFAIRTWVQDYXSFYYKTDDTVKEDAELQSWWKELR 857
D +S HGLRLLI+DYPYAVDGLEIWFAI WV+DY SFYYKTD+ V++D ELQ+WWKELR
Sbjct: 621 DKSSPHGLRLLIKDYPYAVDGLEIWFAIEKWVRDYCSFYYKTDEMVQQDPELQAWWKELR 680
Query: 858 EEGHGDKKDEPWWPKMQTREELIESCTIIIWVASALHAATNFGQYPYAG 1004
EEGHGDKKDEPWWPKMQTREELI+SCTIIIWVASALHAA NFGQYPYAG
Sbjct: 681 EEGHGDKKDEPWWPKMQTREELIDSCTIIIWVASALHAAVNFGQYPYAG 729
>emb|CAD10740.1| lipoxygenase [Corylus avellana]
Length = 873
Score = 209 bits (532), Expect = 5e-53
Identities = 92/110 (83%), Positives = 101/110 (91%)
Frame = +3
Query: 675 QDPTSRHGLRLLIEDYPYAVDGLEIWFAIRTWVQDYXSFYYKTDDTVKEDAELQSWWKEL 854
+D S HGLRLLIEDYPYAVDGLEIW AI+TWV+DY SFYYK+DD V+ D+ELQSWWKEL
Sbjct: 628 KDSNSPHGLRLLIEDYPYAVDGLEIWSAIKTWVEDYCSFYYKSDDRVQNDSELQSWWKEL 687
Query: 855 REEGHGDKKDEPWWPKMQTREELIESCTIIIWVASALHAATNFGQYPYAG 1004
RE GHGDKKDEPWWPKMQTREEL+E+CTIIIW+ASALHAA NFGQYPYAG
Sbjct: 688 REVGHGDKKDEPWWPKMQTREELVETCTIIIWIASALHAAVNFGQYPYAG 737
>emb|CAB94852.1| lipoxygenase [Prunus dulcis]
Length = 862
Score = 207 bits (526), Expect = 3e-52
Identities = 89/110 (80%), Positives = 101/110 (90%)
Frame = +3
Query: 675 QDPTSRHGLRLLIEDYPYAVDGLEIWFAIRTWVQDYXSFYYKTDDTVKEDAELQSWWKEL 854
+D S HGLRLLI+DYPYAVDG+EIWFAI+TWV+DY SFYYKTDD +++D ELQSWWKEL
Sbjct: 617 KDANSPHGLRLLIDDYPYAVDGIEIWFAIKTWVEDYCSFYYKTDDIIQKDIELQSWWKEL 676
Query: 855 REEGHGDKKDEPWWPKMQTREELIESCTIIIWVASALHAATNFGQYPYAG 1004
EEGHGDKKDEPWWPKMQTR++L+E+CTIIIW ASALHAA NFGQYPYAG
Sbjct: 677 VEEGHGDKKDEPWWPKMQTRKDLVETCTIIIWTASALHAAVNFGQYPYAG 726
>gb|AAO03558.1| lipoxygenase 1 [Brassica napus]
Length = 857
Score = 197 bits (501), Expect = 2e-49
Identities = 85/110 (77%), Positives = 97/110 (87%)
Frame = +3
Query: 675 QDPTSRHGLRLLIEDYPYAVDGLEIWFAIRTWVQDYXSFYYKTDDTVKEDAELQSWWKEL 854
+DP + HGLRL IEDYPYAVDGLE+W+AI +WVQDY YYKTD+ V+ D ELQ+WWKE+
Sbjct: 612 EDPEAPHGLRLRIEDYPYAVDGLEVWYAIESWVQDYIPLYYKTDEDVQNDTELQAWWKEV 671
Query: 855 REEGHGDKKDEPWWPKMQTREELIESCTIIIWVASALHAATNFGQYPYAG 1004
REEGHGDKK EPWWPKMQTR+ELI+SCTIIIWVASALHAA +FGQYP AG
Sbjct: 672 REEGHGDKKSEPWWPKMQTRKELIDSCTIIIWVASALHAAVSFGQYPIAG 721
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 876,130,900
Number of Sequences: 1393205
Number of extensions: 19438634
Number of successful extensions: 62255
Number of sequences better than 10.0: 200
Number of HSP's better than 10.0 without gapping: 60416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62228
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 57945683670
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
