Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005694A_C01 KMC005694A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN64171.1| putative WRKY family transcription factor [Arabid... 35 0.72
ref|NP_192845.1| WRKY family transcription factor; protein id: A... 35 0.72
ref|NP_286019.1| Z0370 gene product [Escherichia coli O157:H7 ED... 32 4.7
ref|NP_752347.1| Hypothetical protein ycjY [Escherichia coli CFT... 32 4.7
sp|Q39994|CALX_HELTU Calnexin homolog precursor gi|7441505|pir||... 32 6.1
>gb|AAN64171.1| putative WRKY family transcription factor [Arabidopsis thaliana]
Length = 281
Score = 34.7 bits (78), Expect = 0.72
Identities = 28/81 (34%), Positives = 36/81 (43%), Gaps = 11/81 (13%)
Frame = -1
Query: 456 QTQLLFRTGA-ESNYFSFP-TFQLKEFNGVYNQPRFEFEI--------TEIISTNTSAPN 307
+ L RTG S FSFP T L + + F + T +ISTNTS +
Sbjct: 194 RASLTVRTGGLGSEAFSFPVTSPLYTYESINGGGTFYHHVGSSGPSDFTGLISTNTSTGS 253
Query: 306 FPILDFNFSLD-QVELDPNFP 247
PI D NF D E++ FP
Sbjct: 254 SPIFDVNFQFDPTAEINTGFP 274
>ref|NP_192845.1| WRKY family transcription factor; protein id: At4g11070.1,
supported by cDNA: gi_17064163 [Arabidopsis thaliana]
gi|7486348|pir||T01927 hypothetical protein F2P3.16 -
Arabidopsis thaliana gi|3600061|gb|AAC35548.1| contains
similarity to DNA binding proteins [Arabidopsis
thaliana] gi|4850286|emb|CAB43042.1| putative protein
[Arabidopsis thaliana] gi|7267805|emb|CAB81208.1|
putative protein [Arabidopsis thaliana]
gi|17064164|gb|AAL35289.1|AF442396_1 WRKY transcription
factor 41 [Arabidopsis thaliana]
gi|22136602|gb|AAM91620.1| unknown protein [Arabidopsis
thaliana]
Length = 313
Score = 34.7 bits (78), Expect = 0.72
Identities = 28/81 (34%), Positives = 36/81 (43%), Gaps = 11/81 (13%)
Frame = -1
Query: 456 QTQLLFRTGA-ESNYFSFP-TFQLKEFNGVYNQPRFEFEI--------TEIISTNTSAPN 307
+ L RTG S FSFP T L + + F + T +ISTNTS +
Sbjct: 226 RASLTVRTGGLGSEAFSFPVTSPLYTYESINGGGTFYHHVGSSGPSDFTGLISTNTSTGS 285
Query: 306 FPILDFNFSLD-QVELDPNFP 247
PI D NF D E++ FP
Sbjct: 286 SPIFDVNFQFDPTAEINTGFP 306
>ref|NP_286019.1| Z0370 gene product [Escherichia coli O157:H7 EDL933]
gi|15829586|ref|NP_308359.1| hypothetical protein
[Escherichia coli O157:H7] gi|25389756|pir||D90670
hypothetical protein ECs0332 [imported] - Escherichia
coli (strain O157:H7, substrain RIMD 0509952)
gi|25500090|pir||G85520 hypothetical protein Z0370
[imported] - Escherichia coli (strain O157:H7,
substrain EDL933) gi|12513091|gb|AAG54627.1|AE005207_2
Z0370 gene product [Escherichia coli O157:H7 EDL933]
gi|13359789|dbj|BAB33755.1| hypothetical protein
[Escherichia coli O157:H7]
Length = 306
Score = 32.0 bits (71), Expect = 4.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 528 CMAQENSSLIPSALEKDSFLSSLFQTQLLFRTGAESNYFSFPTFQLKEFN 379
C Q + S+ +AL K F+ F +G E Y PT ++K+F+
Sbjct: 41 CKEQTSGSVYGAALAKAGFIVIAFDASFQGSSGGEPRYLEDPTMRVKDFS 90
>ref|NP_752347.1| Hypothetical protein ycjY [Escherichia coli CFT073]
gi|26106706|gb|AAN78891.1|AE016756_74 Hypothetical
protein ycjY [Escherichia coli CFT073]
Length = 306
Score = 32.0 bits (71), Expect = 4.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 528 CMAQENSSLIPSALEKDSFLSSLFQTQLLFRTGAESNYFSFPTFQLKEFN 379
C Q + S+ +AL K F+ F +G E Y PT ++K+F+
Sbjct: 41 CKEQTSGSVYGAALAKAGFIVIAFDASFQGSSGGEPRYLEDPTMRVKDFS 90
>sp|Q39994|CALX_HELTU Calnexin homolog precursor gi|7441505|pir||T10892 probable calnexin
- Jerusalem artichoke gi|510907|emb|CAA84491.1| calnexin
[Helianthus tuberosus]
Length = 540
Score = 31.6 bits (70), Expect = 6.1
Identities = 14/38 (36%), Positives = 25/38 (64%), Gaps = 1/38 (2%)
Frame = +3
Query: 402 LEMKNSLILLLYEIIVGSGKGCSGRNLS-LRPKESSWS 512
+E+K+ I+L YE+ + +G C G L LRP+++ W+
Sbjct: 91 VELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWT 128
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,625,010
Number of Sequences: 1393205
Number of extensions: 9627695
Number of successful extensions: 18460
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18455
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
