Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005653A_C01 KMC005653A_c01
(687 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193760.1| leucine-rich repeat transmembrane protein kinas... 235 4e-61
ref|NP_201371.1| leucine-rich repeat transmembrane protein kinas... 215 4e-55
gb|AAF91322.1|AF244888_1 receptor-like protein kinase 1 [Glycine... 214 7e-55
gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine... 214 1e-54
gb|AAF91323.1|AF244889_1 receptor-like protein kinase 2 [Glycine... 214 1e-54
>ref|NP_193760.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g20270.1 [Arabidopsis thaliana]
gi|7434425|pir||T05335 hypothetical protein F1C12.190 -
Arabidopsis thaliana gi|2982444|emb|CAA18252.1| CLV1
receptor kinase like protein [Arabidopsis thaliana]
gi|7268822|emb|CAB79027.1| CLV1 receptor kinase like
protein [Arabidopsis thaliana]
Length = 992
Score = 235 bits (600), Expect = 4e-61
Identities = 115/146 (78%), Positives = 134/146 (91%), Gaps = 1/146 (0%)
Frame = -3
Query: 685 LNSDFEAHVADFGLAKFM-QDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVV 509
L +FEAHVADFGLAKFM QD G SECMSSIAGSYGYIAPEYAYTL++DEKSDVYSFGVV
Sbjct: 844 LGPEFEAHVADFGLAKFMMQDNGASECMSSIAGSYGYIAPEYAYTLRIDEKSDVYSFGVV 903
Query: 508 LLELITGRRPVGDFEEEGLDIVQWTKMQTNWNKEMVMKILDERLSHIPLDEAEQVFFVAM 329
LLELITGR+PV +F EEG+DIVQW+K+QTN N++ V+KI+D+RLS+IPL EA ++FFVAM
Sbjct: 904 LLELITGRKPVDNFGEEGIDIVQWSKIQTNCNRQGVVKIIDQRLSNIPLAEAMELFFVAM 963
Query: 328 LCVNEHSVERPTMREVVEMLAQAKQP 251
LCV EHSVERPTMREVV+M++QAKQP
Sbjct: 964 LCVQEHSVERPTMREVVQMISQAKQP 989
>ref|NP_201371.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g65700.1, supported by cDNA: gi_20466695
[Arabidopsis thaliana] gi|7434429|pir||T05898
hypothetical protein F6H11.170 - Arabidopsis thaliana
gi|2827715|emb|CAA16688.1| receptor protein kinase - like
protein [Arabidopsis thaliana]
gi|10177328|dbj|BAB10677.1| receptor protein kinase-like
protein [Arabidopsis thaliana] gi|20466696|gb|AAM20665.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 1003
Score = 215 bits (548), Expect = 4e-55
Identities = 104/141 (73%), Positives = 125/141 (87%)
Frame = -3
Query: 685 LNSDFEAHVADFGLAKFMQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 506
L+S+FEAHVADFGLAKF+QD+GTSECMS+IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL
Sbjct: 828 LDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 887
Query: 505 LELITGRRPVGDFEEEGLDIVQWTKMQTNWNKEMVMKILDERLSHIPLDEAEQVFFVAML 326
LEL+TGR+PVG+F +G+DIVQW + T+ NK+ V+K+LD RLS IP+ E VF+VAML
Sbjct: 888 LELVTGRKPVGEF-GDGVDIVQWVRKMTDSNKDSVLKVLDPRLSSIPIHEVTHVFYVAML 946
Query: 325 CVNEHSVERPTMREVVEMLAQ 263
CV E +VERPTMREVV++L +
Sbjct: 947 CVEEQAVERPTMREVVQILTE 967
>gb|AAF91322.1|AF244888_1 receptor-like protein kinase 1 [Glycine max]
Length = 1008
Score = 214 bits (546), Expect = 7e-55
Identities = 104/145 (71%), Positives = 125/145 (85%)
Frame = -3
Query: 685 LNSDFEAHVADFGLAKFMQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 506
L+S+FEAHVADFGLAKF+QD+G SECMS+IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL
Sbjct: 820 LDSNFEAHVADFGLAKFLQDSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 879
Query: 505 LELITGRRPVGDFEEEGLDIVQWTKMQTNWNKEMVMKILDERLSHIPLDEAEQVFFVAML 326
LEL+TGR+PVG+F +G+DIVQW + T+ NKE V+K+LD RL +PL E VF+VAML
Sbjct: 880 LELVTGRKPVGEF-GDGVDIVQWVRKMTDSNKEGVLKVLDSRLPSVPLHEVMHVFYVAML 938
Query: 325 CVNEHSVERPTMREVVEMLAQAKQP 251
CV E +VERPTMREVV++L + +P
Sbjct: 939 CVEEQAVERPTMREVVQILTELPKP 963
>gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine max]
Length = 1012
Score = 214 bits (544), Expect = 1e-54
Identities = 105/145 (72%), Positives = 125/145 (85%)
Frame = -3
Query: 685 LNSDFEAHVADFGLAKFMQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 506
L+S+ EAHVADFGLAKF+QD+GTSECMS+IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL
Sbjct: 824 LDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 883
Query: 505 LELITGRRPVGDFEEEGLDIVQWTKMQTNWNKEMVMKILDERLSHIPLDEAEQVFFVAML 326
LELITGR+PVG+F +G+DIVQW + T+ NKE V+K+LD RL +PL E VF+VAML
Sbjct: 884 LELITGRKPVGEF-GDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAML 942
Query: 325 CVNEHSVERPTMREVVEMLAQAKQP 251
CV E +VERPTMREVV++L + +P
Sbjct: 943 CVEEQAVERPTMREVVQILTELPKP 967
>gb|AAF91323.1|AF244889_1 receptor-like protein kinase 2 [Glycine max]
Length = 1012
Score = 214 bits (544), Expect = 1e-54
Identities = 105/145 (72%), Positives = 125/145 (85%)
Frame = -3
Query: 685 LNSDFEAHVADFGLAKFMQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 506
L+S+ EAHVADFGLAKF+QD+GTSECMS+IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL
Sbjct: 824 LDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 883
Query: 505 LELITGRRPVGDFEEEGLDIVQWTKMQTNWNKEMVMKILDERLSHIPLDEAEQVFFVAML 326
LELITGR+PVG+F +G+DIVQW + T+ NKE V+K+LD RL +PL E VF+VAML
Sbjct: 884 LELITGRKPVGEF-GDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAML 942
Query: 325 CVNEHSVERPTMREVVEMLAQAKQP 251
CV E +VERPTMREVV++L + +P
Sbjct: 943 CVEEQAVERPTMREVVQILTELPKP 967
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 610,003,293
Number of Sequences: 1393205
Number of extensions: 13750565
Number of successful extensions: 43834
Number of sequences better than 10.0: 5859
Number of HSP's better than 10.0 without gapping: 39260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41166
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
