Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005638A_C01 KMC005638A_c01
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme gi|54206... 145 4e-34
ref|NP_200446.1| pyruvate kinase; protein id: At5g56350.1, suppo... 136 2e-31
ref|NP_194369.1| pyruvate kinase like protein; protein id: At4g2... 124 1e-27
dbj|BAA88185.1| unnamed protein product [Oryza sativa (japonica ... 121 5e-27
sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme gi|22576... 119 2e-26
>sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme gi|542061|pir||S41379 pyruvate
kinase (EC 2.7.1.40), cytosolic - common tobacco
gi|444023|emb|CAA82628.1| pyruvate kinase [Nicotiana
tabacum]
Length = 508
Score = 145 bits (365), Expect = 4e-34
Identities = 69/89 (77%), Positives = 81/89 (90%)
Frame = -1
Query: 568 SVVVPEIKTDSFDWSVSDEAPARHSLIFRGLIPILSAASARASSDETTEEAIEFAIQHAQ 389
SVVVPEIKTDSFDW+ SDE+PARHSLIFRGL+P+L A SARAS +E+TEEA++FA+QHA+
Sbjct: 420 SVVVPEIKTDSFDWTCSDESPARHSLIFRGLVPVLHAGSARASHEESTEEALDFALQHAK 479
Query: 388 TKGLCHNGDAVVVLHRVGNASVIKILTVK 302
TKGLC GD+VV LHRVG ASVIKI+TVK
Sbjct: 480 TKGLCKQGDSVVALHRVGTASVIKIVTVK 508
>ref|NP_200446.1| pyruvate kinase; protein id: At5g56350.1, supported by cDNA:
31580., supported by cDNA: gi_15450941, supported by
cDNA: gi_17978780 [Arabidopsis thaliana]
gi|10177833|dbj|BAB11262.1| pyruvate kinase [Arabidopsis
thaliana] gi|15450942|gb|AAK96742.1| pyruvate kinase
[Arabidopsis thaliana] gi|17978781|gb|AAL47384.1|
pyruvate kinase [Arabidopsis thaliana]
gi|21592702|gb|AAM64651.1| pyruvate kinase [Arabidopsis
thaliana]
Length = 498
Score = 136 bits (342), Expect = 2e-31
Identities = 70/89 (78%), Positives = 76/89 (84%)
Frame = -1
Query: 568 SVVVPEIKTDSFDWSVSDEAPARHSLIFRGLIPILSAASARASSDETTEEAIEFAIQHAQ 389
SVVVPEIKTD FDWS SDE+PARHSLIFRGLIP+L A SARAS DE+TEEAIEFA Q+ +
Sbjct: 410 SVVVPEIKTDFFDWSCSDESPARHSLIFRGLIPVLYAGSARASHDESTEEAIEFATQYGK 469
Query: 388 TKGLCHNGDAVVVLHRVGNASVIKILTVK 302
K LC GD+VV L RVGNASVIKILTVK
Sbjct: 470 EKELCKTGDSVVALLRVGNASVIKILTVK 498
>ref|NP_194369.1| pyruvate kinase like protein; protein id: At4g26390.1 [Arabidopsis
thaliana] gi|4033431|sp|O65595|KPYC_ARATH Probable
pyruvate kinase, cytosolic isozyme (PK)
gi|7434442|pir||T05065 pyruvate kinase (EC 2.7.1.40) -
Arabidopsis thaliana gi|2982467|emb|CAA18231.1| pyruvate
kinase like protein [Arabidopsis thaliana]
gi|7269491|emb|CAB79494.1| pyruvate kinase like protein
[Arabidopsis thaliana]
Length = 497
Score = 124 bits (310), Expect = 1e-27
Identities = 61/89 (68%), Positives = 73/89 (81%)
Frame = -1
Query: 568 SVVVPEIKTDSFDWSVSDEAPARHSLIFRGLIPILSAASARASSDETTEEAIEFAIQHAQ 389
SVVVPEI +DSFDW+ S+EAPARHSLI+RGL+P+L A SARAS DE+TEE +EFA ++ +
Sbjct: 409 SVVVPEITSDSFDWACSNEAPARHSLIYRGLVPVLYAGSARASIDESTEETLEFASEYGK 468
Query: 388 TKGLCHNGDAVVVLHRVGNASVIKILTVK 302
K LC GD+VV L R GNA VIKILTVK
Sbjct: 469 KKQLCKTGDSVVALFRTGNAIVIKILTVK 497
>dbj|BAA88185.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 507
Score = 121 bits (304), Expect = 5e-27
Identities = 60/88 (68%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = -1
Query: 568 SVVVPEIK-TDSFDWSVSDEAPARHSLIFRGLIPILSAASARASSDETTEEAIEFAIQHA 392
SVVVPE+K TDSFDW+ SDEAPARHSLI RG+IP+LSAA+A+A +E TEEA+ FAI +A
Sbjct: 418 SVVVPELKQTDSFDWTCSDEAPARHSLIVRGVIPMLSAATAKAFDNEATEEALGFAISNA 477
Query: 391 QTKGLCHNGDAVVVLHRVGNASVIKILT 308
+ GLC++G++VV LHR+G ASVIK+LT
Sbjct: 478 KAMGLCNSGESVVALHRIGTASVIKLLT 505
>sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme gi|22576|emb|CAA37727.1|
pyruvate kinase [Solanum tuberosum]
Length = 510
Score = 119 bits (299), Expect = 2e-26
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = -1
Query: 568 SVVVPEIKTDSFDWSVSDEAPARHSLIFRGLIPILSAASARASSDETTEEAIEFAIQHAQ 389
SVVVP + TDSFDWS+SDE PARHSL++RGLIP+L SA+A+ E+TE +E A++ A
Sbjct: 422 SVVVPVLTTDSFDWSISDETPARHSLVYRGLIPLLGEGSAKATDSESTEVILEAALKSAV 481
Query: 388 TKGLCHNGDAVVVLHRVGNASVIKILTVK 302
T+GLC GDAVV LHR+G+ASVIKI VK
Sbjct: 482 TRGLCKPGDAVVALHRIGSASVIKICVVK 510
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 466,979,703
Number of Sequences: 1393205
Number of extensions: 9486396
Number of successful extensions: 23269
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 21966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23117
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
