Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005600A_C01 KMC005600A_c01
(572 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C96704 unknown protein, 23065-20358 [imported] - Arabidopsi... 80 2e-14
ref|NP_564921.1| expressed protein; protein id: At1g68100.1, sup... 80 2e-14
ref|NP_524931.1| Catecholamines up CG10449-PA gi|12585215|sp|Q9V... 39 0.046
gb|EAA12294.1| agCP11392 [Anopheles gambiae str. PEST] 37 0.23
gb|EAA13010.1| ebiP4967 [Anopheles gambiae str. PEST] 35 0.67
>pir||C96704 unknown protein, 23065-20358 [imported] - Arabidopsis thaliana
gi|12324080|gb|AAG52008.1|AC012563_18 unknown protein;
23065-20358 [Arabidopsis thaliana]
Length = 450
Score = 80.1 bits (196), Expect = 2e-14
Identities = 38/53 (71%), Positives = 48/53 (89%)
Frame = -1
Query: 572 IEGFTAGGFIYIAIAGVLAEMNNNGKTTLRSTALQITSLTMGMAVALVISLVE 414
IEGFTAGGFIYIA+AGVLAEMNN+GK+TL+++A + SL +GM+VAL ISL+E
Sbjct: 398 IEGFTAGGFIYIAVAGVLAEMNNSGKSTLKNSACHLISLILGMSVALCISLIE 450
>ref|NP_564921.1| expressed protein; protein id: At1g68100.1, supported by cDNA:
111031., supported by cDNA: gi_6942042 [Arabidopsis
thaliana] gi|6942043|gb|AAF32299.1|AF216524_1
IAA-alanine resistance protein 1 [Arabidopsis thaliana]
gi|21536769|gb|AAM61101.1| unknown [Arabidopsis
thaliana] gi|25054860|gb|AAN71919.1| unknown protein
[Arabidopsis thaliana]
Length = 469
Score = 80.1 bits (196), Expect = 2e-14
Identities = 38/53 (71%), Positives = 48/53 (89%)
Frame = -1
Query: 572 IEGFTAGGFIYIAIAGVLAEMNNNGKTTLRSTALQITSLTMGMAVALVISLVE 414
IEGFTAGGFIYIA+AGVLAEMNN+GK+TL+++A + SL +GM+VAL ISL+E
Sbjct: 417 IEGFTAGGFIYIAVAGVLAEMNNSGKSTLKNSACHLISLILGMSVALCISLIE 469
>ref|NP_524931.1| Catecholamines up CG10449-PA gi|12585215|sp|Q9V3A4|CSUP_DROME
Catecholamines up protein
gi|7141146|gb|AAF37226.1|AF216584_1 seven transmembrane
protein Catecholamines up [Drosophila melanogaster]
gi|7298525|gb|AAF53744.1| CG10449-PA [Drosophila
melanogaster] gi|16197973|gb|AAL13757.1| LD23513p
[Drosophila melanogaster]
Length = 449
Score = 38.9 bits (89), Expect = 0.046
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -1
Query: 563 FTAGGFIYIAIAGVLAEMNNNGKTTLRSTALQITSLTMGMAVALVISLVE 414
FTAGGFIYIA VL E+ T L+ + +I +L G+A+ +VI+ E
Sbjct: 401 FTAGGFIYIATVSVLPELLEE-STKLKQSLKEIFALLTGVALMIVIAKFE 449
>gb|EAA12294.1| agCP11392 [Anopheles gambiae str. PEST]
Length = 514
Score = 36.6 bits (83), Expect = 0.23
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -1
Query: 563 FTAGGFIYIAIAGVLAEMNNNGKTTLRSTALQITSLTMGMAVALVISLVE 414
FTAGGFIYIA V+ E+ T L + +IT+L G+ + ++I+ E
Sbjct: 464 FTAGGFIYIATVSVIPELLEE-STKLWQSLKEITALLAGVGMMVIIAKFE 512
>gb|EAA13010.1| ebiP4967 [Anopheles gambiae str. PEST]
Length = 466
Score = 35.0 bits (79), Expect = 0.67
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = -1
Query: 560 TAGGFIYIAIAGVLAEMNNN---GKTTLRSTALQITSLTMGMAVALVISLVE 414
TAG F+YIA++ ++ EM N+ L+ +Q+ L +G + L+I+L E
Sbjct: 408 TAGTFLYIALSDLVPEMRNDVARSDQKLKVILIQLAGLALGAVIMLLIALNE 459
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,339,123
Number of Sequences: 1393205
Number of extensions: 9723473
Number of successful extensions: 22547
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 21900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22538
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
