Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005584A_C01 KMC005584A_c01
(540 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188573.1| putative tyrosine phosphatase; protein id: At3g... 102 4e-21
gb|AAO13749.1|AF268257_1 PTEN-like protein [Arabidopsis thaliana] 101 5e-21
ref|NP_566929.1| putative tyrosine phosphatase; protein id: At3g... 64 9e-10
pir||T45864 probable tyrosine phosphatase - Arabidopsis thaliana... 64 9e-10
ref|XP_209582.1| hypothetical protein XP_209582 [Homo sapiens] 49 5e-05
>ref|NP_188573.1| putative tyrosine phosphatase; protein id: At3g19420.1, supported
by cDNA: gi_17979062 [Arabidopsis thaliana]
gi|11994464|dbj|BAB02466.1| tyrosine phosphatase-like
protein [Arabidopsis thaliana]
gi|17979063|gb|AAL49799.1| putative tyrosine phosphatase
[Arabidopsis thaliana]
Length = 611
Score = 102 bits (253), Expect = 4e-21
Identities = 58/115 (50%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Frame = +1
Query: 205 VPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFSGSQDDSS 384
VP PP A A G D+S S+LS GIS+WAKNLK+ F+ +Q+DS
Sbjct: 15 VPDNHPPPPPVVTAAEA----GSDDSPKGVASKLSAAGISNWAKNLKVPQPFASTQNDSG 70
Query: 385 SANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGS---GNITKGLVDSS 540
N KS+FA+FTS LG+RLSPKSP T+D T E TS + S G ITKGLVD+S
Sbjct: 71 VENTEKSAFAKFTSGLGIRLSPKSPQTNDTTTEGTSSATESSFIGTITKGLVDTS 125
>gb|AAO13749.1|AF268257_1 PTEN-like protein [Arabidopsis thaliana]
Length = 611
Score = 101 bits (252), Expect = 5e-21
Identities = 58/115 (50%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Frame = +1
Query: 205 VPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFSGSQDDSS 384
VP PP A A G D+S S+LS GIS+WAKNLK+ F+ +Q+DS
Sbjct: 15 VPDNPPPPLPVVTAAEA----GSDDSPKGVASKLSAAGISNWAKNLKVPQPFASTQNDSG 70
Query: 385 SANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGS---GNITKGLVDSS 540
N KS+FA+FTS LG+RLSPKSP T+D T E TS + S G ITKGLVD+S
Sbjct: 71 VENTEKSAFAKFTSGLGIRLSPKSPQTNDTTTEGTSSATESSFIGTITKGLVDTS 125
>ref|NP_566929.1| putative tyrosine phosphatase; protein id: At3g50110.1, supported
by cDNA: gi_16604644 [Arabidopsis thaliana]
gi|24030328|gb|AAN41331.1| putative tyrosine phosphatase
[Arabidopsis thaliana]
Length = 632
Score = 64.3 bits (155), Expect = 9e-10
Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASAS----VASGEDNSAGEAP-SRLSPTGISSWAKNLKI 348
+ +S AKV T PA TG E + V +S E+P S S +G+SSWAK
Sbjct: 51 TEASVAKVDDTQMPASSTGSEPLSKTDDIVPCPPGSSPRESPPSIFSSSGLSSWAK---- 106
Query: 349 SPSFSGSQDDSSSANAGKSSFARFTSNLGLRLSPK-SPATDDRTNETTSQSNGSGNITKG 525
SF Q D + ++G S+F RFTS LGL L K S D + T ++TK
Sbjct: 107 --SFKFQQQDPNRTDSGMSAFTRFTSELGLHLPTKGSEEVGDSRSSNTQVGGAFESLTKA 164
Query: 526 LVDSS 540
+VDSS
Sbjct: 165 VVDSS 169
>pir||T45864 probable tyrosine phosphatase - Arabidopsis thaliana
gi|6522932|emb|CAB62119.1| putative tyrosine phosphatase
[Arabidopsis thaliana]
Length = 628
Score = 64.3 bits (155), Expect = 9e-10
Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASAS----VASGEDNSAGEAP-SRLSPTGISSWAKNLKI 348
+ +S AKV T PA TG E + V +S E+P S S +G+SSWAK
Sbjct: 51 TEASVAKVDDTQMPASSTGSEPLSKTDDIVPCPPGSSPRESPPSIFSSSGLSSWAK---- 106
Query: 349 SPSFSGSQDDSSSANAGKSSFARFTSNLGLRLSPK-SPATDDRTNETTSQSNGSGNITKG 525
SF Q D + ++G S+F RFTS LGL L K S D + T ++TK
Sbjct: 107 --SFKFQQQDPNRTDSGMSAFTRFTSELGLHLPTKGSEEVGDSRSSNTQVGGAFESLTKA 164
Query: 526 LVDSS 540
+VDSS
Sbjct: 165 VVDSS 169
>ref|XP_209582.1| hypothetical protein XP_209582 [Homo sapiens]
Length = 252
Score = 48.5 bits (114), Expect = 5e-05
Identities = 34/115 (29%), Positives = 61/115 (52%), Gaps = 1/115 (0%)
Frame = +1
Query: 166 SVPADVSNSS-PAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNL 342
S+P+ S+SS P+ PS+S P+ + +S +S S+ + S SP+ +S + +
Sbjct: 54 SIPSSSSSSSSPSSSPSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSS 113
Query: 343 KISPSFSGSQDDSSSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGS 507
SPS S S SSS++ SS + +S+ SP S ++ ++ ++S S+ S
Sbjct: 114 SSSPSSSSS---SSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSS 165
Score = 48.5 bits (114), Expect = 5e-05
Identities = 34/108 (31%), Positives = 56/108 (51%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFS 363
S SS + S+SP + + +S+S +S +S+ +PS S + SS + SPS S
Sbjct: 116 SPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSS 175
Query: 364 GSQDDSSSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGS 507
GS SS+N+ SS + S+ SP+S + ++ T+S S+ S
Sbjct: 176 GS--SPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSSSS 221
Score = 45.1 bits (105), Expect = 6e-04
Identities = 32/119 (26%), Positives = 56/119 (46%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFS 363
S+SSP+ STS P+ + +S+ +S +S+ + S + SS + SPS S
Sbjct: 79 SSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSS 138
Query: 364 GSQDDSSSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGSGNITKGLVDSS 540
S SS +++ S + +S+ SP S ++ + + S SN S + + SS
Sbjct: 139 SSSSSSSPSSSSSSPSSSSSSSSSSSSSPSS-SSPSSSGSSPSSSNSSPSSSSSSPSSS 196
Score = 42.7 bits (99), Expect = 0.003
Identities = 31/110 (28%), Positives = 56/110 (50%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFS 363
S SS + S+SP + + +S+S S +S+ +PS S + SS + + SPS S
Sbjct: 91 SPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSS-SSSSSSSPSSS 149
Query: 364 GSQDDSSSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGSGN 513
S SSS+++ SS + +S+ S S + ++ ++S S+ S +
Sbjct: 150 SSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSS 199
Score = 40.0 bits (92), Expect = 0.018
Identities = 30/105 (28%), Positives = 52/105 (48%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFS 363
S+SSP+ S+S + + +S S +S +S+ +PS SP+ S + SPS S
Sbjct: 131 SSSSPSS-SSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 189
Query: 364 GSQDDSSSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQS 498
S SSS++ S + +S+ S SP++ ++ + S S
Sbjct: 190 SSSPSSSSSSPSPRSSSPSSSS----SSTSSPSSSSPSSSSPSSS 230
Score = 37.4 bits (85), Expect = 0.12
Identities = 33/124 (26%), Positives = 54/124 (42%), Gaps = 5/124 (4%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFS 363
S+S+ + S+S P+ + +S+ +S S+ + S SP+ SS SPS S
Sbjct: 104 SSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSS-------SPSSS 156
Query: 364 GSQDDSSSANAGKSS-----FARFTSNLGLRLSPKSPATDDRTNETTSQSNGSGNITKGL 528
S SSS++ SS + +SN S SP++ + S S S + +
Sbjct: 157 SSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSS 216
Query: 529 VDSS 540
SS
Sbjct: 217 PSSS 220
Score = 35.4 bits (80), Expect = 0.44
Identities = 27/108 (25%), Positives = 51/108 (47%)
Frame = +1
Query: 184 SNSSPAKVPSTSPPAKETGGEASASVASGEDNSAGEAPSRLSPTGISSWAKNLKISPSFS 363
S+SSP+ S+S + + +S+S +S +S+ +PS S + SS + + S S
Sbjct: 99 SSSSPSSSNSSSSSSSSSPSSSSSS-SSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSS 157
Query: 364 GSQDDSSSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGS 507
S SSS+ + S + +S SP S ++ ++ ++ S
Sbjct: 158 SSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSS 205
Score = 32.7 bits (73), Expect = 2.9
Identities = 28/113 (24%), Positives = 48/113 (41%), Gaps = 15/113 (13%)
Frame = +1
Query: 247 ASASVASGEDNSAGEAPSRLSPTGI---------------SSWAKNLKISPSFSGSQDDS 381
+S +S +S +PS SP+ SS + + SPS S S S
Sbjct: 53 SSIPSSSSSSSSPSSSPSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSS 112
Query: 382 SSANAGKSSFARFTSNLGLRLSPKSPATDDRTNETTSQSNGSGNITKGLVDSS 540
SS++ SS + +S SP S ++ ++ ++S S+ S + + SS
Sbjct: 113 SSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSS 165
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.311 0.128 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,625,706
Number of Sequences: 1393205
Number of extensions: 11222796
Number of successful extensions: 38173
Number of sequences better than 10.0: 483
Number of HSP's better than 10.0 without gapping: 34145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37611
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
