Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005539A_C01 KMC005539A_c01
(496 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08551 Ca2+-transporting ATPase homolog F27B13.140 - Arabid... 126 2e-28
ref|NP_194719.1| potential calcium-transporting ATPase 10, plasm... 126 2e-28
sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, pl... 105 2e-22
ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma... 105 2e-22
dbj|BAC56802.1| putative Calcium-transporting ATPase 8, plasma m... 96 2e-19
>pir||T08551 Ca2+-transporting ATPase homolog F27B13.140 - Arabidopsis thaliana
gi|4914414|emb|CAB43665.1| Ca2+-transporting ATPase-like
protein [Arabidopsis thaliana]
Length = 1093
Score = 126 bits (316), Expect = 2e-28
Identities = 65/117 (55%), Positives = 88/117 (74%)
Frame = +3
Query: 144 DLEAGSPTDFDGGDCSSDPFDVTRTKNAPVQRLRRWRQAALVLNASRRFRYTLDLKKEEE 323
D+EAG+ + + D PFD+ TKNAPV+RLRRWRQAALVLNASRRFRYTLDLK+EE+
Sbjct: 15 DVEAGTSSFTEYED---SPFDIASTKNAPVERLRRWRQAALVLNASRRFRYTLDLKREED 71
Query: 324 RKQILKLIIVHTHAIQAAYRFKAAGEKTDGLGTVIPPSSSPGEFLIGQEKLSSVSRD 494
+KQ+L+ + H AI+AA+ FKAA + G+ + + P+ G+F IGQE++ S+SRD
Sbjct: 72 KKQMLRKMRAHAQAIRAAHLFKAAASRVTGIASPL-PTPGGGDFGIGQEQIVSISRD 127
>ref|NP_194719.1| potential calcium-transporting ATPase 10, plasma membrane-type
(Ca2+-ATPase, isoform 10); protein id: At4g29900.1
[Arabidopsis thaliana] gi|12643856|sp|Q9SZR1|ACAA_ARATH
Potential calcium-transporting ATPase 10, plasma
membrane-type (Ca2+-ATPase, isoform 10)
gi|25290667|pir||C85349 Ca2+-transporting ATPase-like
protein [imported] - Arabidopsis thaliana
gi|7269889|emb|CAB79748.1| Ca2+-transporting ATPase-like
protein [Arabidopsis thaliana]
Length = 1069
Score = 126 bits (316), Expect = 2e-28
Identities = 65/117 (55%), Positives = 88/117 (74%)
Frame = +3
Query: 144 DLEAGSPTDFDGGDCSSDPFDVTRTKNAPVQRLRRWRQAALVLNASRRFRYTLDLKKEEE 323
D+EAG+ + + D PFD+ TKNAPV+RLRRWRQAALVLNASRRFRYTLDLK+EE+
Sbjct: 15 DVEAGTSSFTEYED---SPFDIASTKNAPVERLRRWRQAALVLNASRRFRYTLDLKREED 71
Query: 324 RKQILKLIIVHTHAIQAAYRFKAAGEKTDGLGTVIPPSSSPGEFLIGQEKLSSVSRD 494
+KQ+L+ + H AI+AA+ FKAA + G+ + + P+ G+F IGQE++ S+SRD
Sbjct: 72 KKQMLRKMRAHAQAIRAAHLFKAAASRVTGIASPL-PTPGGGDFGIGQEQIVSISRD 127
>sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, plasma membrane-type
(Ca2+-ATPase, isoform 9) gi|9280219|dbj|BAB01709.1|
Ca2+-transporting ATPase [Arabidopsis thaliana]
Length = 1073
Score = 105 bits (263), Expect = 2e-22
Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Frame = +3
Query: 144 DLEAGSPTDFDGGDCSS------DPFDVTRTKNAPVQRLRRWRQAALVLNASRRFRYTLD 305
D+EAGS + D DPFD+ TKNA V+ LRRWRQAALVLNASRRFRYTLD
Sbjct: 7 DMEAGSAKTEEHSDHEELQHDPDDPFDIDNTKNASVESLRRWRQAALVLNASRRFRYTLD 66
Query: 306 LKKEEERKQILKLIIVHTHAIQAAYRFKAAGEKTDGLGTVIPPSSSPGEFLIGQEKLSSV 485
L KEE ++I H I+AA FK AGE+ G+ P++S G F I EKL S+
Sbjct: 67 LNKEEHYDNRRRMIRAHAQVIRAALLFKLAGEQQIAFGS-STPAASTGNFDIDLEKLVSM 125
Query: 486 SRD 494
+R+
Sbjct: 126 TRN 128
>ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma membrane-type
(Ca2+-ATPase, isoform 9); protein id: At3g21180.1
[Arabidopsis thaliana]
Length = 1086
Score = 105 bits (263), Expect = 2e-22
Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Frame = +3
Query: 144 DLEAGSPTDFDGGDCSS------DPFDVTRTKNAPVQRLRRWRQAALVLNASRRFRYTLD 305
D+EAGS + D DPFD+ TKNA V+ LRRWRQAALVLNASRRFRYTLD
Sbjct: 20 DMEAGSAKTEEHSDHEELQHDPDDPFDIDNTKNASVESLRRWRQAALVLNASRRFRYTLD 79
Query: 306 LKKEEERKQILKLIIVHTHAIQAAYRFKAAGEKTDGLGTVIPPSSSPGEFLIGQEKLSSV 485
L KEE ++I H I+AA FK AGE+ G+ P++S G F I EKL S+
Sbjct: 80 LNKEEHYDNRRRMIRAHAQVIRAALLFKLAGEQQIAFGS-STPAASTGNFDIDLEKLVSM 138
Query: 486 SRD 494
+R+
Sbjct: 139 TRN 141
>dbj|BAC56802.1| putative Calcium-transporting ATPase 8, plasma membrane-type [Oryza
sativa (japonica cultivar-group)]
gi|28411839|dbj|BAC57314.1| putative
Calcium-transporting ATPase 8, plasma membrane-type
[Oryza sativa (japonica cultivar-group)]
Length = 1082
Score = 95.9 bits (237), Expect = 2e-19
Identities = 59/116 (50%), Positives = 72/116 (61%), Gaps = 1/116 (0%)
Frame = +3
Query: 150 EAGSPTDFDGGDCSSDPFDVTRTKNAPVQRLRRWRQAALVLNASRRFRYTLDLKKEEERK 329
E D D + D FD+ KNA RLRRWRQAALVLNASRRFRYTLDLKKEEE++
Sbjct: 17 ELDGAEDTDVEEKFDDAFDIPH-KNASHDRLRRWRQAALVLNASRRFRYTLDLKKEEEKE 75
Query: 330 QILKLIIVHTHAIQAAYRFKAAGEK-TDGLGTVIPPSSSPGEFLIGQEKLSSVSRD 494
I + I H I+AA+ FK AGEK T I ++ F I EKL++++RD
Sbjct: 76 MIRRKIRAHAQVIRAAFLFKEAGEKDLREAYTGIKLETASRSFPIELEKLTALNRD 131
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 424,876,286
Number of Sequences: 1393205
Number of extensions: 8751683
Number of successful extensions: 25330
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 24547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25311
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
