Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005473A_C01 KMC005473A_c01
(609 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195984.1| protein kinase -like protein; protein id: At5g0... 178 6e-44
pir||T47546 protein kinase-like - Arabidopsis thaliana gi|752971... 177 1e-43
ref|NP_566973.1| protein kinase - like; protein id: At3g52890.1,... 177 1e-43
ref|NP_181176.1| putative protein kinase; protein id: At2g36350.... 172 4e-42
gb|AAL32579.1| protein kinase 5 [Arabidopsis thaliana] gi|202599... 160 1e-38
>ref|NP_195984.1| protein kinase -like protein; protein id: At5g03640.1 [Arabidopsis
thaliana] gi|11358723|pir||T48391 protein kinase-like
protein - Arabidopsis thaliana gi|7340649|emb|CAB82929.1|
protein kinase-like protein [Arabidopsis thaliana]
Length = 926
Score = 178 bits (451), Expect = 6e-44
Identities = 82/104 (78%), Positives = 92/104 (87%)
Frame = -3
Query: 604 AVDWWTFGIFLFELLYGKTPFKGLANEDTLANVVSQSLKFPSAPIVSFHARDLIRGLLIK 425
AVDWWTFGIFL+ELLYGKTPFKG NE+T+ANVV QSLKFP P VSF A+DLIRGLL+K
Sbjct: 798 AVDWWTFGIFLYELLYGKTPFKGATNEETIANVVLQSLKFPDNPNVSFQAKDLIRGLLVK 857
Query: 424 DPENRLGSVKGAAEIKQHPFSEGLNWALIRCAAPPELPKFHDFG 293
+PENRLG+ KGAAEIK+H F EGLNWALIRCA PPELP F+D+G
Sbjct: 858 EPENRLGTEKGAAEIKRHAFFEGLNWALIRCAIPPELPDFYDYG 901
>pir||T47546 protein kinase-like - Arabidopsis thaliana gi|7529713|emb|CAB86893.1|
protein kinase-like [Arabidopsis thaliana]
gi|21703143|gb|AAM74511.1| AT3g52890/F8J2_60 [Arabidopsis
thaliana] gi|25054838|gb|AAN71909.1| putative protein
kinase [Arabidopsis thaliana] gi|25090422|gb|AAN72297.1|
At3g52890/F8J2_60 [Arabidopsis thaliana]
Length = 934
Score = 177 bits (448), Expect = 1e-43
Identities = 80/115 (69%), Positives = 95/115 (82%)
Frame = -3
Query: 604 AVDWWTFGIFLFELLYGKTPFKGLANEDTLANVVSQSLKFPSAPIVSFHARDLIRGLLIK 425
AVDWWTFG+ L+ELLYGKTPFKG N++TLANVV Q+LKFP +P+VSF A+DLIRGLL+K
Sbjct: 799 AVDWWTFGVLLYELLYGKTPFKGYNNDETLANVVLQNLKFPDSPLVSFQAKDLIRGLLVK 858
Query: 424 DPENRLGSVKGAAEIKQHPFSEGLNWALIRCAAPPELPKFHDFGTSAPPIATEDG 260
+PENRLGS KG+ EIK+HPF EGLNWALIRCA PPELP F+++G A G
Sbjct: 859 EPENRLGSEKGSVEIKRHPFFEGLNWALIRCAIPPELPDFYEYGGGPEAAADSPG 913
>ref|NP_566973.1| protein kinase - like; protein id: At3g52890.1, supported by cDNA:
gi_7716429 [Arabidopsis thaliana]
gi|7716430|gb|AAF68383.1|AF236104_1 protein kinase KIPK
[Arabidopsis thaliana]
Length = 744
Score = 177 bits (448), Expect = 1e-43
Identities = 80/115 (69%), Positives = 95/115 (82%)
Frame = -3
Query: 604 AVDWWTFGIFLFELLYGKTPFKGLANEDTLANVVSQSLKFPSAPIVSFHARDLIRGLLIK 425
AVDWWTFG+ L+ELLYGKTPFKG N++TLANVV Q+LKFP +P+VSF A+DLIRGLL+K
Sbjct: 609 AVDWWTFGVLLYELLYGKTPFKGYNNDETLANVVLQNLKFPDSPLVSFQAKDLIRGLLVK 668
Query: 424 DPENRLGSVKGAAEIKQHPFSEGLNWALIRCAAPPELPKFHDFGTSAPPIATEDG 260
+PENRLGS KG+ EIK+HPF EGLNWALIRCA PPELP F+++G A G
Sbjct: 669 EPENRLGSEKGSVEIKRHPFFEGLNWALIRCAIPPELPDFYEYGGGPEAAADSPG 723
>ref|NP_181176.1| putative protein kinase; protein id: At2g36350.1 [Arabidopsis
thaliana] gi|25287717|pir||F84779 probable protein kinase
[imported] - Arabidopsis thaliana
gi|4510342|gb|AAD21431.1| putative protein kinase
[Arabidopsis thaliana]
Length = 949
Score = 172 bits (435), Expect = 4e-42
Identities = 85/132 (64%), Positives = 99/132 (74%), Gaps = 11/132 (8%)
Frame = -3
Query: 604 AVDWWTFGIFLFELLYGKTPFKGLANEDTLANVVSQSLKFPSAPIVSFHARDLIRGLLIK 425
AVDWWTFG+ L+ELLYGKTPFKG NE+TL+NVV Q+LKFP +P+VSF A++LIR LL+K
Sbjct: 818 AVDWWTFGVLLYELLYGKTPFKGYDNEETLSNVVYQNLKFPDSPLVSFQAKELIRRLLVK 877
Query: 424 DPENRLGSVKGAAEIKQHPFSEGLNWALIRCAAPPELPKFHDFGTSAPPI---------- 275
DPE+RLGS KGAAEIK+HPF EGLNWALIRCA PPELP +D G +
Sbjct: 878 DPESRLGSEKGAAEIKRHPFFEGLNWALIRCAIPPELPDIYDNGATEATSPEGNNRYLEC 937
Query: 274 -ATEDGQEFELF 242
A D EFELF
Sbjct: 938 KAIGDHLEFELF 949
>gb|AAL32579.1| protein kinase 5 [Arabidopsis thaliana] gi|20259910|gb|AAM13302.1|
protein kinase 5 [Arabidopsis thaliana]
Length = 586
Score = 160 bits (405), Expect = 1e-38
Identities = 71/100 (71%), Positives = 84/100 (84%)
Frame = -3
Query: 607 NAVDWWTFGIFLFELLYGKTPFKGLANEDTLANVVSQSLKFPSAPIVSFHARDLIRGLLI 428
+AVDWWTFGIFL+ELL+G+TPFKG N TL NVV Q L+FP P+VSF ARDLIRGLL+
Sbjct: 446 SAVDWWTFGIFLYELLFGRTPFKGSGNRQTLFNVVGQPLRFPETPVVSFAARDLIRGLLM 505
Query: 427 KDPENRLGSVKGAAEIKQHPFSEGLNWALIRCAAPPELPK 308
K+P+ RLG +GA E+KQHPF EG+NWALIRCA PPE+PK
Sbjct: 506 KEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIPK 545
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 495,451,959
Number of Sequences: 1393205
Number of extensions: 10128127
Number of successful extensions: 34787
Number of sequences better than 10.0: 2900
Number of HSP's better than 10.0 without gapping: 32331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33237
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
