Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005385A_C01 KMC005385A_c01
(1400 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM22747.1| pyruvate kinase-like [Deschampsia antarctica] 333 4e-90
ref|NP_566976.1| pyruvate kinase - like protein; protein id: At3... 332 7e-90
pir||T47556 pyruvate kinase-like protein - Arabidopsis thaliana ... 332 7e-90
pir||C84782 probable pyruvate kinase [imported] - Arabidopsis th... 328 1e-88
ref|NP_565850.1| putative pyruvate kinase; protein id: At2g36580... 328 1e-88
>gb|AAM22747.1| pyruvate kinase-like [Deschampsia antarctica]
Length = 491
Score = 333 bits (854), Expect = 4e-90
Identities = 168/188 (89%), Positives = 181/188 (95%)
Frame = -3
Query: 930 GSDAILLGAETLRGLYPVETISIVGKICAEAEKVYNHDWHFKKTVKHVGEPMSHLESIAS 751
GSDAILLGAETLRGLYPVETIS VG+ICAEAEKV+N D +FK+TVK+VGEPM+HLESIAS
Sbjct: 304 GSDAILLGAETLRGLYPVETISTVGRICAEAEKVFNQDLYFKRTVKYVGEPMTHLESIAS 363
Query: 750 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEAR 571
SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPV+SVVIP+LKTNQL+W+FTGAFEAR
Sbjct: 364 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFTGAFEAR 423
Query: 570 QSLIVRGLFPMLADPRHPAESNTGTNESILKVALDHGKAFGVIKSHDRVVVCQKVGDSSV 391
QSLIVRGLFPMLADPRHPAES + TNES+LKVALDHGK GVIKSHDRVVVCQKVGDSSV
Sbjct: 424 QSLIVRGLFPMLADPRHPAESTSTTNESVLKVALDHGKTSGVIKSHDRVVVCQKVGDSSV 483
Query: 390 VKIIELED 367
VKIIEL+D
Sbjct: 484 VKIIELDD 491
Score = 92.8 bits (229), Expect = 1e-17
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = -3
Query: 1293 QVFLFQKAAIYKCNMAGKPVLVTRIVDSMTDNLRPTRAEATDVANAVLDG 1144
+VFLFQK+A++KCNMAGKP +VTR+VDSMTDNLRPTRAEATDVANAVLDG
Sbjct: 255 KVFLFQKSALHKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDG 304
>ref|NP_566976.1| pyruvate kinase - like protein; protein id: At3g52990.1, supported
by cDNA: 12298., supported by cDNA: gi_14194098
[Arabidopsis thaliana]
gi|14194099|gb|AAK56244.1|AF367255_1 AT3g52990/F8J2_160
[Arabidopsis thaliana] gi|21537185|gb|AAM61526.1|
pyruvate kinase-like protein [Arabidopsis thaliana]
gi|23397188|gb|AAN31877.1| putative pyruvate kinase
[Arabidopsis thaliana] gi|24111299|gb|AAN46773.1|
At3g52990/F8J2_160 [Arabidopsis thaliana]
Length = 527
Score = 332 bits (852), Expect = 7e-90
Identities = 168/188 (89%), Positives = 181/188 (95%)
Frame = -3
Query: 930 GSDAILLGAETLRGLYPVETISIVGKICAEAEKVYNHDWHFKKTVKHVGEPMSHLESIAS 751
GSDAILLGAETLRGLYPVETIS VG+ICAEAEKV+N D +FKKTVK+VGEPM+HLESIAS
Sbjct: 340 GSDAILLGAETLRGLYPVETISTVGRICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIAS 399
Query: 750 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEAR 571
SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIP++KTNQL+W+F+GAFEAR
Sbjct: 400 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRVKTNQLKWSFSGAFEAR 459
Query: 570 QSLIVRGLFPMLADPRHPAESNTGTNESILKVALDHGKAFGVIKSHDRVVVCQKVGDSSV 391
QSLIVRGLFPMLADPRHPAES + TNES+LKVALDHGK GVIKSHDRVVVCQKVGD+SV
Sbjct: 460 QSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKHAGVIKSHDRVVVCQKVGDASV 519
Query: 390 VKIIELED 367
VKIIELED
Sbjct: 520 VKIIELED 527
Score = 94.7 bits (234), Expect = 3e-18
Identities = 44/50 (88%), Positives = 49/50 (98%)
Frame = -3
Query: 1293 QVFLFQKAAIYKCNMAGKPVLVTRIVDSMTDNLRPTRAEATDVANAVLDG 1144
+VFLFQKAA+YKCNMAGKP ++TR+VDSMTDNLRPTRAEATDVANAVLDG
Sbjct: 291 KVFLFQKAALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDG 340
>pir||T47556 pyruvate kinase-like protein - Arabidopsis thaliana
gi|7529723|emb|CAB86903.1| pyruvate kinase-like protein
[Arabidopsis thaliana]
Length = 514
Score = 332 bits (852), Expect = 7e-90
Identities = 168/188 (89%), Positives = 181/188 (95%)
Frame = -3
Query: 930 GSDAILLGAETLRGLYPVETISIVGKICAEAEKVYNHDWHFKKTVKHVGEPMSHLESIAS 751
GSDAILLGAETLRGLYPVETIS VG+ICAEAEKV+N D +FKKTVK+VGEPM+HLESIAS
Sbjct: 327 GSDAILLGAETLRGLYPVETISTVGRICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIAS 386
Query: 750 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEAR 571
SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIP++KTNQL+W+F+GAFEAR
Sbjct: 387 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRVKTNQLKWSFSGAFEAR 446
Query: 570 QSLIVRGLFPMLADPRHPAESNTGTNESILKVALDHGKAFGVIKSHDRVVVCQKVGDSSV 391
QSLIVRGLFPMLADPRHPAES + TNES+LKVALDHGK GVIKSHDRVVVCQKVGD+SV
Sbjct: 447 QSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKHAGVIKSHDRVVVCQKVGDASV 506
Query: 390 VKIIELED 367
VKIIELED
Sbjct: 507 VKIIELED 514
Score = 94.7 bits (234), Expect = 3e-18
Identities = 44/50 (88%), Positives = 49/50 (98%)
Frame = -3
Query: 1293 QVFLFQKAAIYKCNMAGKPVLVTRIVDSMTDNLRPTRAEATDVANAVLDG 1144
+VFLFQKAA+YKCNMAGKP ++TR+VDSMTDNLRPTRAEATDVANAVLDG
Sbjct: 278 KVFLFQKAALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDG 327
>pir||C84782 probable pyruvate kinase [imported] - Arabidopsis thaliana
Length = 464
Score = 328 bits (841), Expect = 1e-88
Identities = 166/188 (88%), Positives = 178/188 (94%)
Frame = -3
Query: 930 GSDAILLGAETLRGLYPVETISIVGKICAEAEKVYNHDWHFKKTVKHVGEPMSHLESIAS 751
GSDAILLGAETLRGLYPVETIS VG+IC EAEKV+N D FKKTVK+VGEPM+HLESIAS
Sbjct: 277 GSDAILLGAETLRGLYPVETISTVGRICCEAEKVFNQDLFFKKTVKYVGEPMTHLESIAS 336
Query: 750 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEAR 571
SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPV+SVVIP+L TNQL+W+F+GAFEAR
Sbjct: 337 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLTTNQLKWSFSGAFEAR 396
Query: 570 QSLIVRGLFPMLADPRHPAESNTGTNESILKVALDHGKAFGVIKSHDRVVVCQKVGDSSV 391
QSLIVRGLFPMLADPRHPAES + TNES+LKVALDHGK GVIKSHDRVVVCQKVGD+SV
Sbjct: 397 QSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKQAGVIKSHDRVVVCQKVGDASV 456
Query: 390 VKIIELED 367
VKIIELED
Sbjct: 457 VKIIELED 464
Score = 85.5 bits (210), Expect = 2e-15
Identities = 39/45 (86%), Positives = 44/45 (97%)
Frame = -3
Query: 1278 QKAAIYKCNMAGKPVLVTRIVDSMTDNLRPTRAEATDVANAVLDG 1144
+KAA+YKCNMAGKP ++TR+VDSMTDNLRPTRAEATDVANAVLDG
Sbjct: 233 EKAALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDG 277
>ref|NP_565850.1| putative pyruvate kinase; protein id: At2g36580.1, supported by
cDNA: 120685., supported by cDNA: gi_17978969
[Arabidopsis thaliana] gi|17978970|gb|AAL47446.1|
At2g36580/F1O11.21 [Arabidopsis thaliana]
gi|20197921|gb|AAD24640.2| putative pyruvate kinase
[Arabidopsis thaliana]
Length = 527
Score = 328 bits (841), Expect = 1e-88
Identities = 166/188 (88%), Positives = 178/188 (94%)
Frame = -3
Query: 930 GSDAILLGAETLRGLYPVETISIVGKICAEAEKVYNHDWHFKKTVKHVGEPMSHLESIAS 751
GSDAILLGAETLRGLYPVETIS VG+IC EAEKV+N D FKKTVK+VGEPM+HLESIAS
Sbjct: 340 GSDAILLGAETLRGLYPVETISTVGRICCEAEKVFNQDLFFKKTVKYVGEPMTHLESIAS 399
Query: 750 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEAR 571
SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPV+SVVIP+L TNQL+W+F+GAFEAR
Sbjct: 400 SAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLTTNQLKWSFSGAFEAR 459
Query: 570 QSLIVRGLFPMLADPRHPAESNTGTNESILKVALDHGKAFGVIKSHDRVVVCQKVGDSSV 391
QSLIVRGLFPMLADPRHPAES + TNES+LKVALDHGK GVIKSHDRVVVCQKVGD+SV
Sbjct: 460 QSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKQAGVIKSHDRVVVCQKVGDASV 519
Query: 390 VKIIELED 367
VKIIELED
Sbjct: 520 VKIIELED 527
Score = 94.7 bits (234), Expect = 3e-18
Identities = 44/50 (88%), Positives = 49/50 (98%)
Frame = -3
Query: 1293 QVFLFQKAAIYKCNMAGKPVLVTRIVDSMTDNLRPTRAEATDVANAVLDG 1144
+VFLFQKAA+YKCNMAGKP ++TR+VDSMTDNLRPTRAEATDVANAVLDG
Sbjct: 291 KVFLFQKAALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDG 340
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,115,767,709
Number of Sequences: 1393205
Number of extensions: 23903239
Number of successful extensions: 60458
Number of sequences better than 10.0: 364
Number of HSP's better than 10.0 without gapping: 53060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59832
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 92123999868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
