Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005352A_C01 KMC005352A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174260.1| lipase/hydrolase, putative; protein id: At1g296... 70 2e-11
gb|AAM64368.1| lipase/hydrolase, putative [Arabidopsis thaliana] 70 2e-11
dbj|BAB21153.1| GDSL-motif lipase/hydrolase-like protein [Oryza ... 69 3e-11
gb|AAM65973.1| lipase/hydrolase, putative [Arabidopsis thaliana] 69 3e-11
ref|NP_174259.1| lipase/hydrolase, putative; protein id: At1g296... 69 3e-11
>ref|NP_174260.1| lipase/hydrolase, putative; protein id: At1g29670.1, supported by
cDNA: 23556., supported by cDNA: gi_18086454
[Arabidopsis thaliana] gi|25336248|pir||A86420 probable
lipase/hydrolase, 118270-120144 [imported] - Arabidopsis
thaliana gi|12323546|gb|AAG51758.1|AC068667_37
lipase/hydrolase, putative; 118270-120144 [Arabidopsis
thaliana] gi|18086455|gb|AAL57681.1| At1g29670/F15D2_22
[Arabidopsis thaliana]
Length = 363
Score = 70.1 bits (170), Expect = 2e-11
Identities = 27/53 (50%), Positives = 37/53 (68%)
Frame = -2
Query: 515 CIPNQTPCQNRDEYVFWDAFHPTKAVNILTAYASYNGSDPNFTYPVDIEHLVE 357
C+P Q PC++R+ YVFWDAFHPT+A N++ A SYN + YP+DI L +
Sbjct: 310 CLPGQRPCRDRNAYVFWDAFHPTEAANVIIARRSYNAQSASDAYPMDISRLAQ 362
>gb|AAM64368.1| lipase/hydrolase, putative [Arabidopsis thaliana]
Length = 363
Score = 70.1 bits (170), Expect = 2e-11
Identities = 27/53 (50%), Positives = 37/53 (68%)
Frame = -2
Query: 515 CIPNQTPCQNRDEYVFWDAFHPTKAVNILTAYASYNGSDPNFTYPVDIEHLVE 357
C+P Q PC++R+ YVFWDAFHPT+A N++ A SYN + YP+DI L +
Sbjct: 310 CLPGQRPCRDRNAYVFWDAFHPTEAANVIIARRSYNAQSASDAYPMDISRLAQ 362
>dbj|BAB21153.1| GDSL-motif lipase/hydrolase-like protein [Oryza sativa (japonica
cultivar-group)] gi|20161163|dbj|BAB90091.1| GDSL-motif
lipase/hydrolase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 363
Score = 69.3 bits (168), Expect = 3e-11
Identities = 26/51 (50%), Positives = 35/51 (67%)
Frame = -2
Query: 515 CIPNQTPCQNRDEYVFWDAFHPTKAVNILTAYASYNGSDPNFTYPVDIEHL 363
C+P + PC NRD+++FWDAFHP++A NI+ SY PN YP+DI L
Sbjct: 310 CLPYEAPCSNRDQHIFWDAFHPSEAANIIVGRRSYRAESPNDAYPMDIATL 360
>gb|AAM65973.1| lipase/hydrolase, putative [Arabidopsis thaliana]
Length = 364
Score = 68.9 bits (167), Expect = 3e-11
Identities = 28/53 (52%), Positives = 34/53 (63%)
Frame = -2
Query: 515 CIPNQTPCQNRDEYVFWDAFHPTKAVNILTAYASYNGSDPNFTYPVDIEHLVE 357
C+P + PC NRDEYVFWDAFHP+ A N A SYN + YP+DI L +
Sbjct: 311 CLPGEPPCLNRDEYVFWDAFHPSAAANTAIAKRSYNAQRSSDVYPIDISQLAQ 363
>ref|NP_174259.1| lipase/hydrolase, putative; protein id: At1g29660.1, supported by
cDNA: 6680., supported by cDNA: gi_15215767 [Arabidopsis
thaliana] gi|25336246|pir||H86419 probable
lipase/hydrolase, 114382-116051 [imported] - Arabidopsis
thaliana gi|12323544|gb|AAG51756.1|AC068667_35
lipase/hydrolase, putative; 114382-116051 [Arabidopsis
thaliana] gi|15215768|gb|AAK91429.1| At1g29660/F15D2_21
[Arabidopsis thaliana] gi|22137090|gb|AAM91390.1|
At1g29660/F15D2_21 [Arabidopsis thaliana]
Length = 364
Score = 68.9 bits (167), Expect = 3e-11
Identities = 28/53 (52%), Positives = 34/53 (63%)
Frame = -2
Query: 515 CIPNQTPCQNRDEYVFWDAFHPTKAVNILTAYASYNGSDPNFTYPVDIEHLVE 357
C+P + PC NRDEYVFWDAFHP+ A N A SYN + YP+DI L +
Sbjct: 311 CLPGEPPCLNRDEYVFWDAFHPSAAANTAIAKRSYNAQRSSDVYPIDISQLAQ 363
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 436,533,984
Number of Sequences: 1393205
Number of extensions: 8715075
Number of successful extensions: 19747
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 19206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19722
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
