Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005264A_C01 KMC005264A_c01
(494 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK43885.1|AF370508_1 putative protein kinase gb|AAD22129 [Ar... 152 2e-36
ref|NP_176759.1| polyamine oxidase, putative; protein id: At1g65... 152 2e-36
pir||D96682 protein F1E22.18 [imported] - Arabidopsis thaliana g... 142 2e-33
gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thaliana] 134 6e-31
ref|NP_181830.1| putative amine oxidase; protein id: At2g43020.1... 134 6e-31
>gb|AAK43885.1|AF370508_1 putative protein kinase gb|AAD22129 [Arabidopsis thaliana]
Length = 497
Score = 152 bits (384), Expect = 2e-36
Identities = 72/120 (60%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
Frame = -3
Query: 489 ANFVMLHLKKMFPDASEPVQYLVSHWGTDPNSLGCYSYDLVGKPHDVYDKLRAPLGNLFF 310
ANFVML LKKMFPDA +P QYLV+ WGTDPN+LGCY+YD+VG P D+Y +L P+ N+FF
Sbjct: 373 ANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFF 432
Query: 309 GGEAVSLENQGSVHGAYSAGVMAAENCQRFISEQQGHMESVPLSSV--SHSILE-STIPI 139
GGEAV++E+QGS HGA+ AGV A++NCQR+I E+ G E + L S+ + ILE +T+P+
Sbjct: 433 GGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKLKLVSLMGNSDILETATVPL 492
>ref|NP_176759.1| polyamine oxidase, putative; protein id: At1g65840.1, supported by
cDNA: gi_13877614 [Arabidopsis thaliana]
gi|23198290|gb|AAN15672.1| putative protein kinase
gb|AAD22129 [Arabidopsis thaliana]
Length = 497
Score = 152 bits (384), Expect = 2e-36
Identities = 72/120 (60%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
Frame = -3
Query: 489 ANFVMLHLKKMFPDASEPVQYLVSHWGTDPNSLGCYSYDLVGKPHDVYDKLRAPLGNLFF 310
ANFVML LKKMFPDA +P QYLV+ WGTDPN+LGCY+YD+VG P D+Y +L P+ N+FF
Sbjct: 373 ANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFF 432
Query: 309 GGEAVSLENQGSVHGAYSAGVMAAENCQRFISEQQGHMESVPLSSV--SHSILE-STIPI 139
GGEAV++E+QGS HGA+ AGV A++NCQR+I E+ G E + L S+ + ILE +T+P+
Sbjct: 433 GGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKLKLVSLMGNSDILETATVPL 492
>pir||D96682 protein F1E22.18 [imported] - Arabidopsis thaliana
gi|6686400|gb|AAF23834.1|AC007234_6 F1E22.18
[Arabidopsis thaliana]
Length = 516
Score = 142 bits (358), Expect = 2e-33
Identities = 73/139 (52%), Positives = 96/139 (68%), Gaps = 22/139 (15%)
Frame = -3
Query: 489 ANFVMLHLKKMFPDASEPV-------------------QYLVSHWGTDPNSLGCYSYDLV 367
ANFVML LKKMFPDA +PV QYLV+ WGTDPN+LGCY+YD+V
Sbjct: 373 ANFVMLQLKKMFPDAPDPVTSLSYLYCSLAHILKQKQAQYLVTRWGTDPNTLGCYAYDVV 432
Query: 366 GKPHDVYDKLRAPLGNLFFGGEAVSLENQGSVHGAYSAGVMAAENCQRFISEQQGHMESV 187
G P D+Y +L P+ N+FFGGEAV++E+QGS HGA+ AGV A++NCQR+I E+ G E +
Sbjct: 433 GMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKL 492
Query: 186 PLSSV--SHSILE-STIPI 139
L S+ + ILE +T+P+
Sbjct: 493 KLVSLMGNSDILETATVPL 511
>gb|AAL75899.1| At2g43020/MFL8.12 [Arabidopsis thaliana]
Length = 490
Score = 134 bits (337), Expect = 6e-31
Identities = 60/100 (60%), Positives = 78/100 (78%)
Frame = -3
Query: 492 AANFVMLHLKKMFPDASEPVQYLVSHWGTDPNSLGCYSYDLVGKPHDVYDKLRAPLGNLF 313
AANF +L L+++ PDA PVQYLVS WG+D NS+G YSYD+VGKPHD+Y++LR P+ NLF
Sbjct: 370 AANFAVLQLQRILPDALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLF 429
Query: 312 FGGEAVSLENQGSVHGAYSAGVMAAENCQRFISEQQGHME 193
F GEA S GSVHGAYS G+MAAE+C+ + E+ G ++
Sbjct: 430 FAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVLERYGELD 469
>ref|NP_181830.1| putative amine oxidase; protein id: At2g43020.1, supported by cDNA:
gi_18650597 [Arabidopsis thaliana]
gi|25408829|pir||A84861 probable amine oxidase
[imported] - Arabidopsis thaliana
gi|4531444|gb|AAD22129.1| putative amine oxidase
[Arabidopsis thaliana]
Length = 490
Score = 134 bits (337), Expect = 6e-31
Identities = 60/100 (60%), Positives = 78/100 (78%)
Frame = -3
Query: 492 AANFVMLHLKKMFPDASEPVQYLVSHWGTDPNSLGCYSYDLVGKPHDVYDKLRAPLGNLF 313
AANF +L L+++ PDA PVQYLVS WG+D NS+G YSYD+VGKPHD+Y++LR P+ NLF
Sbjct: 370 AANFAVLQLQRILPDALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLF 429
Query: 312 FGGEAVSLENQGSVHGAYSAGVMAAENCQRFISEQQGHME 193
F GEA S GSVHGAYS G+MAAE+C+ + E+ G ++
Sbjct: 430 FAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVLERYGELD 469
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 416,518,563
Number of Sequences: 1393205
Number of extensions: 8977305
Number of successful extensions: 23165
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 22212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23045
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
