Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005248A_C01 KMC005248A_c01
(596 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T12040 cysteine proteinase (EC 3.4.22.-) 2 precursor - kidn... 287 8e-77
dbj|BAA92495.1| cysteine protease [Vigna mungo] 286 2e-76
pir||T09528 probable cysteine proteinase (EC 3.4.22.-) precursor... 275 4e-73
gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba] 273 9e-73
gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba] 273 2e-72
>pir||T12040 cysteine proteinase (EC 3.4.22.-) 2 precursor - kidney bean
gi|2511691|emb|CAB17075.1| cysteine proteinase precursor
[Phaseolus vulgaris]
Length = 365
Score = 287 bits (734), Expect = 8e-77
Identities = 141/192 (73%), Positives = 160/192 (82%), Gaps = 2/192 (1%)
Frame = +1
Query: 25 ARPFLLLALIFFSAAVATAAVIDDAEDLLIRQVVPE--VEDHLLNAEHHFSTFKARFGKT 198
AR L L+F + A A DA+D+LIRQVVPE VEDHLLNAEHHFSTFK++FGKT
Sbjct: 2 ARYTLCALLLFAAVAAAAGGASTDADDILIRQVVPEGEVEDHLLNAEHHFSTFKSKFGKT 61
Query: 199 YATEEEHNYRFGVFKKNLILAKSHQKLDPSAVHGVTRFSDLTPSEFRRQFLGLKAPRHLK 378
YAT+EEH++RFGVFK N+ A+ H +LDPSAVHGVT+FSDLTP+EF R+FLGLK R
Sbjct: 62 YATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPAEFHRKFLGLKPLRLPA 121
Query: 379 DAQKAPILPTNDLPTDFDWREKGAVTEVKNQGSCGSCWSFSATGALEGAHYLATGELVSL 558
AQKAPILPTN+LP DFDWR+KGAVT VK+QGSCGSCWSFS TGALEGAH+LATGELVSL
Sbjct: 122 HAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSL 181
Query: 559 SEQQLVDCDHEC 594
SEQQLVDCDH C
Sbjct: 182 SEQQLVDCDHVC 193
>dbj|BAA92495.1| cysteine protease [Vigna mungo]
Length = 364
Score = 286 bits (731), Expect = 2e-76
Identities = 140/189 (74%), Positives = 160/189 (84%), Gaps = 2/189 (1%)
Frame = +1
Query: 34 FLLLALIFFSAAVATAAVIDDAEDLLIRQVVPE--VEDHLLNAEHHFSTFKARFGKTYAT 207
+ L AL+ F+A A A DA+D+LIRQVVPE VEDHLLNAEHHFS FKA+FGKTYAT
Sbjct: 4 YSLCALLLFAAVAAAAGANTDADDILIRQVVPEGEVEDHLLNAEHHFSNFKAKFGKTYAT 63
Query: 208 EEEHNYRFGVFKKNLILAKSHQKLDPSAVHGVTRFSDLTPSEFRRQFLGLKAPRHLKDAQ 387
+EEH++RFGVFK NL A+ H +LDPSAVHGVT+FSDLT +EF+RQFLGLK +AQ
Sbjct: 64 KEEHDHRFGVFKSNLRRARLHAQLDPSAVHGVTKFSDLTAAEFQRQFLGLKPLGLPANAQ 123
Query: 388 KAPILPTNDLPTDFDWREKGAVTEVKNQGSCGSCWSFSATGALEGAHYLATGELVSLSEQ 567
KAPILPTN+LP DFDWR+KGAVT VK+QG+CGSCWSFS TGALEGAH+LATGELVSLSEQ
Sbjct: 124 KAPILPTNNLPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQ 183
Query: 568 QLVDCDHEC 594
QLVDCDH C
Sbjct: 184 QLVDCDHVC 192
>pir||T09528 probable cysteine proteinase (EC 3.4.22.-) precursor - chickpea
gi|3377952|emb|CAA08906.1| cysteine proteinase [Cicer
arietinum]
Length = 362
Score = 275 bits (702), Expect = 4e-73
Identities = 139/186 (74%), Positives = 155/186 (82%), Gaps = 1/186 (0%)
Frame = +1
Query: 40 LLALIFFSAAVATAAVIDDAEDLLIRQVVPEVEDHLLNAEHHFSTFKARFGKTYATEEEH 219
LLAL+ FS VATA D+ +D LIRQV +D LLNAEHHF+TFK++F K+YAT+EEH
Sbjct: 6 LLALLLFSV-VATATKDDNNDDFLIRQVTDHEDDQLLNAEHHFTTFKSKFSKSYATKEEH 64
Query: 220 NYRFGVFKKNLILAKSHQKLDPSAVHGVTRFSDLTPSEFRRQFLGLKAPRHL-KDAQKAP 396
+YRFGVFK NL AK HQKLDPSA HGVT+FSDLT SEFRRQFLGLK L AQKAP
Sbjct: 65 DYRFGVFKSNLKKAKLHQKLDPSAEHGVTKFSDLTASEFRRQFLGLKKRLRLPAHAQKAP 124
Query: 397 ILPTNDLPTDFDWREKGAVTEVKNQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLV 576
ILPTN+LP DFDWREKGAVT VK+QGSCGSCW+FS TGALEGA+YLATG+LVSLSEQQLV
Sbjct: 125 ILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLVSLSEQQLV 184
Query: 577 DCDHEC 594
DCDH C
Sbjct: 185 DCDHVC 190
>gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
Length = 363
Score = 273 bits (699), Expect = 9e-73
Identities = 135/187 (72%), Positives = 158/187 (84%), Gaps = 2/187 (1%)
Frame = +1
Query: 40 LLALIFFSAAVATAAVID-DAEDLLIRQVVPEVEDHLLNAEHHFSTFKARFGKTYATEEE 216
+ A++ F AAVAT++ D + +D +IRQVV EDHLLNAEHHF++FK++F K+Y+T+EE
Sbjct: 6 IFAIVLF-AAVATSSTDDTNTDDFIIRQVVDNEEDHLLNAEHHFTSFKSKFSKSYSTKEE 64
Query: 217 HNYRFGVFKKNLILAKSHQKLDPSAVHGVTRFSDLTPSEFRRQFLGLKAPRHL-KDAQKA 393
H+YRFGVFK NLI AK HQKLDP+A HG+T+FSDLT SEFRRQFLGLK L AQKA
Sbjct: 65 HDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKA 124
Query: 394 PILPTNDLPTDFDWREKGAVTEVKNQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQL 573
PILPT +LP DFDWREKGAVT VK+QGSCGSCW+FS TGALEGAHYLATG+LVSLSEQQL
Sbjct: 125 PILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQL 184
Query: 574 VDCDHEC 594
VDCDH C
Sbjct: 185 VDCDHVC 191
>gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
Length = 363
Score = 273 bits (697), Expect = 2e-72
Identities = 130/186 (69%), Positives = 154/186 (81%), Gaps = 1/186 (0%)
Frame = +1
Query: 40 LLALIFFSAAVATAAVIDDAEDLLIRQVVPEVEDHLLNAEHHFSTFKARFGKTYATEEEH 219
+ A++ F+A ++ + +D +IRQVV EDHLLNAEHHF++FK++F K+Y+T+EEH
Sbjct: 6 IFAIVLFAAVATSSTDNTNTDDFIIRQVVDNEEDHLLNAEHHFTSFKSKFSKSYSTKEEH 65
Query: 220 NYRFGVFKKNLILAKSHQKLDPSAVHGVTRFSDLTPSEFRRQFLGLKAPRHL-KDAQKAP 396
+YRFGVFK NLI AK HQKLDP+A HG+T+FSDLT SEFRRQFLGLK L AQKAP
Sbjct: 66 DYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAP 125
Query: 397 ILPTNDLPTDFDWREKGAVTEVKNQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLV 576
ILPT +LP DFDWREKGAVT VK+QGSCGSCW+FS TGALEGAHYLATG+LVSLSEQQLV
Sbjct: 126 ILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLV 185
Query: 577 DCDHEC 594
DCDH C
Sbjct: 186 DCDHVC 191
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,018,576
Number of Sequences: 1393205
Number of extensions: 13906781
Number of successful extensions: 66038
Number of sequences better than 10.0: 1326
Number of HSP's better than 10.0 without gapping: 53971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63415
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
